[Mesa-users] Help regarding MESA in a HPC

[Susmita Das]

Hi,
Yes- your pbs script should also direct to the other run script; something
like:
cd $WORKDIR
chmod +x cluster.sh
./cluster.sh
So, you cd into the directory that contains your run script and then
execute the run.
Cheers
Susmita

On Thu, Sep 12, 2024 at 5:09 PM ABHIJNAN KAR 20064 <
abhijnank20 at iiserbpr.ac.in> wrote:

> Hi,
> Thanks for your reply. I will install Mesa on my cluster account since
> it's not there. However, one doubt: the PBS job script will handle my job
> submission and run it , once queue is over. However, to run mesa ,
> shouldn't then the running script (having omp no threads etc) be somehow
> directed in job script itself ? (as in , may be the path to mesa
> initialisation script can be mentioned in job script itself  and then cd "
> relevant directory or test_suite of mesa " )?
>
> Regards,
> Abhijnan
>
>
> On Thu, 12 Sept, 2024, 8:16 pm Susmita Das, <susmitadas130 at gmail.com>
> wrote:
>
>> Hi Abhijnan,
>> You should install MESA on your cluster account/ use the appropriate
>> $MESA_DIR if MESA is already installed on the cluster (the system admin of
>> the HPC will be able to help you figure that out).
>> The running script of mesa ( which includes setting the no of threads,
>> setting a path for mesasdk etc) is a separate file and is different from
>> the pbs job submission script- that is, you don't need to mention setting
>> the no of threads, setting a path for mesasdk etc in the pbs script.
>> Hope this helps
>> Cheers
>> Susmita
>>
>> On Thu, Sep 12, 2024 at 2:49 PM ABHIJNAN KAR 20064 <
>> abhijnank20 at iiserbpr.ac.in> wrote:
>>
>>> Hi users,
>>> I am trying to set up mesa in a cluster ( HPC) environment for the first
>>> time. I am new to handling clusters through terminal. I am wondering as to
>>> whether I should install MESA again on cluster or i can directly transfer
>>> the MESA directory/folder from my local computer to the cluster account (
>>> along with mesasdk)? Also, for the running script of mesa ( which includes
>>> setting the no of threads, setting a path for mesasdk etc), should I
>>> mention those in pbs job script itself?
>>> It would be really helpful, if this can be sorted out.
>>> Regards,
>>> Abhijnan Kar(He/his/him)
>>> BS-MS,IISER Berhampur
>>>
>>>
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> mesa-users at lists.mesastar.org
>>> https://lists.mesastar.org/mailman/listinfo/mesa-users
>>>
>>>
>>
>> --
>> Dr. Susmita Das
>> Postdoctoral Research Fellow
>> Konkoly Observatory, CSFK, Budapest
>>
>

-- 
Dr. Susmita Das
Postdoctoral Research Fellow
Konkoly Observatory, CSFK, Budapest
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