[Mesa-users] error while using running several modules on cluster

[Rob Farmer]

When running older mesa's it is advisable to use the sdk from that release.

http://user.astro.wisc.edu/~townsend/static.php?ref=mesasdk#Download

Rob

On Wed, 31 May 2023 at 09:47, Warrick Ball via Mesa-users <
mesa-users at lists.mesastar.org> wrote:

> Hi Aman,
>
> I just searched the mailing list archives [1] for `show_stuff`, which
> turned up this thread:
>
>
> https://lists.mesastar.org/pipermail/mesa-users/2022-August/013938.html
>
> The first suggestion there is to double-check that you ran `./clean`
> before `./install` (perhaps just try again).  If that doesn't work, try
> using MESA SDK version 21.4.1 instead.
>
> Cheers,
> Warrick
>
> [1] https://lists.mesastar.org/pipermail/mesa-users/
>
> ___________
>
> Warrick Ball
> Senior Research Software Engineer
> University of Birmingham
> W.H.Ball at bham.ac.uk
>
> On Wed, 31 May 2023, aman awasthi via Mesa-users wrote:
>
> > CAUTION: This email originated from outside the organisation. Do not
> click links or open attachments unless you recognise the sender and know
> the content is safe.
> > HI Rob,
> >  Just before getting your suggestion, I just tried to install the
> mesa-r15140 again. So I Went into the $MESA_DIR directory and performed
> ./clean and ./install. While  installation, I am getting a similar error
> repeatedly
> >   I am using mesa-r 15140 and mesasdk
> mesasdk-x86_64-linux-22.6.1.tar.gz.   I am trying to install the
> mesa_r15140 on my cluster.
> >
> >
> > Please suggest what I should do.
> >
> > Sincerely
> > Aman
> >
> > The error is as follows
> > ************************************************
> >
> > /home/BHMG2/mesa-r15140/rates
> > building rates package.
> >
> > MAKEDEPF90
> > COMPILE_CMD ../public/rates_def.f90
> > COMPILE_CMD ../private/weak_support.f90
> > COMPILE_CMD ../private/eval_psi.f90
> > COMPILE_BASIC ../private/rates_names.f90
> > COMPILE_CMD ../private/weaklib_tables.f90
> > COMPILE_CMD ../private/rates_reverses.f90
> > COMPILE_CMD ../private/suzuki_tables.f90
> > COMPILE_CMD ../private/coulomb.f90
> > COMPILE_CMD ../private/load_ecapture.f90
> > COMPILE_CMD ../private/eval_coulomb.f90
> > COMPILE_CMD ../private/reaclib_eval.f90
> > COMPILE_CMD ../private/reaclib_support.f90
> > COMPILE_CMD ../private/pycno.f90
> > COMPILE_CMD ../private/screen5.f90
> > COMPILE_CMD ../private/screen_graboske.f90
> > COMPILE_CMD ../private/screen.f90
> > COMPILE_CMD ../private/screen_chugunov.f90
> > COMPILE_CMD ../private/eval_ecapture.f90
> > COMPILE_CMD ../private/reaclib_print.f90
> > COMPILE_CMD ../private/ratelib.f90
> > COMPILE_CMD ../private/reaclib_input.f90
> > COMPILE_CMD ../private/load_weak.f90
> > COMPILE_CMD ../private/eval_weak.f90
> > ../private/eval_weak.f90:337:23:
> >
> >   210 |                call show_stuff
> >       |                              2
> > ......
> >   337 |             do i = 1, n
> >       |                       1
> > Error: Index variable 'i' redefined at (1) in procedure 'show_stuff'
> called from within DO loop at (2)
> > ../private/eval_weak.f90:337:23:
> >
> >   316 |                call show_stuff
> >       |                              2
> > ......
> >   337 |             do i = 1, n
> >       |                       1
> > Error: Index variable 'i' redefined at (1) in procedure 'show_stuff'
> called from within DO loop at (2)
> > make: *** [eval_weak.o] Error 1
> > make: *** Waiting for unfinished jobs....
> >
> > /home/BHMG2/mesa-r15140/rates/make
> > FAILED
> >
> >
> > /home/BHMG2/mesa-r15140/rates
> > ./build_and_test FAILED
> >
> > On Tue, May 30, 2023 at 2:52 PM Rob Farmer <robert.j.farmer37 at gmail.com>
> wrote:
> >       I suggest checking that you have initialized the SDK correctly in
> your submission script (
> https://docs.mesastar.org/en/release-r22.11.1/installation.html#check-that-your-environment-variables-are-set-correctly
> ).
> >
> > If you add:
> >
> > which gfortran
> >
> > to your submission script, what is the output?
> >
> > Rob
> >
> > On Tue, 30 May 2023 at 10:50, aman awasthi via Mesa-users <
> mesa-users at lists.mesastar.org> wrote:
> >       Hi all,
> >
> > I ran a ppisn module in the cluster as a single job submission. It was
> submitted fine, It is in the queue and hopefully will finish soon.
> >
> > But when I am trying to run the several ppisn modules with different
> masses as many jobs submission.   I am getting an error file for each
> module. The error is as follows
> >
> > /home/BHMG2/aman_ppisn_rotation/many_jobs/base/star: error while loading
> shared libraries: libhdf5_fortran.so.200: cannot open shared object file:
> No such file or directory
> >
> > what to do?
> >
> > Also I am using mesa-r15140 and mesasdk-x86_64-linux-22.6.1.tar.gz.
> >
> > Sincerely
> > Aman
> > _______________________________________________
> > mesa-users at lists.mesastar.org
> > https://lists.mesastar.org/mailman/listinfo/mesa-users
> >
> >
> >
> _______________________________________________
> mesa-users at lists.mesastar.org
> https://lists.mesastar.org/mailman/listinfo/mesa-users
>
>
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