[Mesa-users] ./mk suddenly failing

Wed Oct 16 17:19:20 EDT 2019

Sorry Frank,

I am using r12115 with OS 10.14.6 build18G95.

The MESA SDK version is x86_64-osx-10.14-20181104 (I got this from
mesasdk_version.sh).

For the rest I find:

uname -a

18.7.0 Darwin Kernel Version 18.7.0: Tue Aug 20 16:57:14 PDT 2019;
root:xnu-4903.271.2~2/RELEASE_X86_64 x86_64

gfortran -v

Thread model: posix

gcc version 7.2.0 (GCC)

echo $MESASDK_ROOT

/Applications/mesasdk

echo $PATH

/Applications/mesasdk/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin

On Wed, Oct 16, 2019 at 5:15 PM Francis Timmes <fxt44 at mac.com> wrote:
>
> not enough coherent information is being provided
> for someone to offer meaningful help. from the mesasdk page:
>
>
> Be sure to include the following information in your bug report:
>
>         • The version of MESA you are trying to build
>         • The version of the SDK you are using (use the
mesasdk_version.sh command to determine this)
>         • Your platform (machine type, operating system, version)
>
> Also, it would be helpful if you could post the output of the following
commands:
>
>         • uname -a
>         • gfortran -v
>         • echo $MESASDK_ROOT
>         • echo $PATH
>
>
>
> fxt
>
>
>
>
>
> > On Oct 16, 2019, at 2:10 PM, Jeremy Sakstein <sakstein at sas.upenn.edu>
wrote:
> >
> > I tried both of these. When I type the trying to install xcode gives me
this message:
> >
> > command line tools are already installed, use "Software Update" to
install updates.
> >
> > I'm currently using MESA via SSH. Could this be the issue? I don't see
how.
> >
> >
> > On Wed, Oct 16, 2019 at 5:05 PM Francis Timmes <fxt44 at mac.com> wrote:
> > >
> > > also do a
> > >
> > > xcode-select --install
> > >
> > > whenever xcode is updated.
> > >
> > > fxt
> > >
> > >
> > >
> > > > On Oct 16, 2019, at 1:47 PM, Rob Farmer via Mesa-users <
mesa-users at lists.mesastar.org> wrote:
> > > >
> > > > >It worked perfectly fine and I didn't re-install MESA at all. I
just ran ./mk on a test_suite. Sometimes updates get pushed to my computer
and I had to reaccept the XCode terms so maybe that is it?
> > > >
> > > > Maybe, did you try re-running:
> > > > open
/Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg
> > > >
> > > > As the notes on
http://www.astro.wisc.edu/~townsend/static.php?ref=mesasdk#Mac_OS_X mention
this must be re-ran whenever xcode is updated
> > > >
> > > > Rob
> > > >
> > > >
> > > >
> > > > On Wed, 16 Oct 2019 at 16:15, Jeremy Sakstein <
sakstein at sas.upenn.edu> wrote:
> > > > Hi Rob,
> > > >
> > > > I am using r12115 with OS 10.14.6 build18G95.
> > > >
> > > > The MESA SDK version is x86_64-osx-10.14-20181104 (I got this from
mesasdk_version.sh).
> > > >
> > > > It worked perfectly fine and I didn't re-install MESA at all. I
just ran ./mk on a test_suite. Sometimes updates get pushed to my computer
and I had to reaccept the XCode terms so maybe that is it?
> > > >
> > > > Cheers,
> > > >
> > > > Jeremy
> > > >
> > > >
> > > >
> > > > On Wed, Oct 16, 2019 at 4:00 PM Rob Farmer <r.j.farmer at uva.nl>
wrote:
> > > > >
> > > > > Hi,
> > > > >
> > > > > Which OS (plus version) are you on? What mesa version? What
MESASDK version? Did this combination of mesa/mesasdk/os work previously
for you?
> > > > >
> > > > > Rob
> > > > >
> > > > > On Wed, 16 Oct 2019 at 12:29, Jeremy Sakstein <
sakstein at sas.upenn.edu> wrote:
> > > > >>
> > > > >> Hi Everyone,
> > > > >>
> > > > >> So today I tried to compile an example in the test_suite and got
the following error:
> > > > >>
> > > > >> gfortran -Wno-uninitialized -fno-range-check -fmax-errors=7
 -fprotect-parens -fno-sign-zero -fbacktrace -ggdb -finit-real=snan
-fopenmp -fbounds-check -Wuninitialized -Warray-bounds -ggdb -ffree-form -x
f95-cpp-input -I../../../../include -I/Applications/mesasdk/include -c
../src/run_star_extras.f
> > > > >>
> > > > >> gfortran -Wno-uninitialized -fno-range-check -fmax-errors=7
 -fprotect-parens -fno-sign-zero -fbacktrace -ggdb -finit-real=snan
-fopenmp -fbounds-check -Wuninitialized -Warray-bounds -ggdb -ffree-form -x
f95-cpp-input -I../../../../include -I/Applications/mesasdk/include -c
../../../../star/job/run_star.f
> > > > >>
> > > > >> gfortran -Wno-uninitialized -fno-range-check -fmax-errors=7
 -fprotect-parens -fno-sign-zero -fbacktrace -ggdb -finit-real=snan
-fopenmp -fbounds-check -Wuninitialized -Warray-bounds -ggdb -ffree-form -x
f95-cpp-input -I../../../../include -I/Applications/mesasdk/include -c
../src/run.f
> > > > >>
> > > > >> gfortran -fopenmp -o ../star run_star_extras.o run_star.o  run.o
 -L../../../../lib -lstar -lgyre -lionization -latm -lcolors -lnet -leos
-lkap -lrates -lneu -lchem -linterp_2d -linterp_1d -lnum -lmtx -lconst
-lutils -lf2crlibm -lcrlibm  `mesasdk_lapack_link` `mesasdk_blas_link`
`mesasdk_hdf5_link`  `mesasdk_pgplot_link` -lz
> > > > >>
> > > > >> ld: library not found for -lz
> > > > >>
> > > > >> collect2: error: ld returned 1 exit status
> > > > >>
> > > > >> make: *** [star] Error 1
> > > > >>
> > > > >>
> > > > >> I checked the SDK website and it suggested xcode and xquartz may
not be installed so I reinstalled both but this is still not working. I
also googled a bit and tried to set the LD library path and library path to
/user/local/lib but this still doesn't work.
> > > > >>
> > > > >> Is anyone able to help me with this?
> > > > >>
> > > > >> Cheers,
> > > > >>
> > > > >> Jeremy
> > > > _______________________________________________
> > > > mesa-users at lists.mesastar.org
> > > > https://lists.mesastar.org/mailman/listinfo/mesa-users
> > > >
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