[Mesa-users] Compile issue with r11554

[Eric Sandquist]

For closure, this issue was resolved by freshly downloading the MESA
distribution, cleaning first, then installing the code. Not sure which of
those was most important, but it worked.

Thanks,
Eric

On Tue, Apr 30, 2019 at 9:52 AM Eric Sandquist <esandquist at sdsu.edu> wrote:

> Hi Frank -
>
> No, I am still having the compile issue. The mesasdk is the most recent
> (March 15 2019) version.
>
> Eric
>
> On Thu, Apr 25, 2019 at 5:39 AM Francis Timmes <fxt44 at mac.com> wrote:
>
>> hi eric,
>>
>> did this install issue resolve itself?
>>
>> if not, what mesasdk version are you using?
>>
>> fxt
>>
>>
>>
>>
>> > On Apr 23, 2019, at 4:03 PM, Eric Sandquist via Mesa-users <
>> mesa-users at lists.mesastar.org> wrote:
>> >
>> > Hello -
>> >
>> > I run into a problem in the eos portion of the MESA compile after
>> having installed the most recent version of sdk (seemingly successfully):
>> >
>> > gfortran -fopenmp -o ../run/ceos create_DT2_eos_files.o -L../../../lib
>> -leos -lchem -linterp_2d -linterp_1d -lnum -lf2crlibm -lcrlibm -lmtx
>> -lconst -lutils `mesasdk_lapack_link` `mesasdk_blas_link`
>> `mesasdk_hdf5_link`
>> > Undefined symbols for architecture x86_64:
>> >   "__gfortran_stop_numeric_f08", referenced from:
>> >       _init_mesa.3387 in create_DT2_eos_files.o
>> > ld: symbol(s) not found for architecture x86_64
>> > collect2: error: ld returned 1 exit status
>> > make: *** [ceos] Error 1
>> >
>> > /Users/esandquist/codes/mesa-r11554/eos/eosDT2_builder/make
>> > build FAILED
>> >
>> > It wasn't clear where the gfortran error was coming from and why this
>> was the first place it showed up. Ideas?
>> > System information:
>> > I am running macOS 10.13.6 (High Sierra).
>> >
>> > uname -a gives:
>> > Darwin bronte.sdsu.edu 17.7.0 Darwin Kernel Version 17.7.0: Thu Dec 20
>> 21:47:19 PST 2018; root:xnu-4570.71.22~1/RELEASE_X86_64 x86_64
>> >
>> > gfortran -v gives:
>> > Using built-in specs.
>> > COLLECT_GCC=/Applications/mesasdk/bin/gfortran.exec
>> >
>> COLLECT_LTO_WRAPPER=/Applications/mesasdk/libexec/gcc/x86_64-apple-darwin18.2.0/8.3.0/lto-wrapper
>> > Target: x86_64-apple-darwin18.2.0
>> > Configured with: /Users/townsend/devel/mesasdk-src/gcc/configure
>> CC='gcc -D_FORTIFY_SOURCE=0' --build=x86_64-apple-darwin18.2.0
>> --prefix=/Applications/mesasdk --with-gmp=/Applications/mesasdk
>> --with-mpfr=/Applications/mesasdk --with-mpc=/Applications/mesasdk
>> --enable-languages=c,c++,fortran --disable-multilib --disable-nls
>> --disable-libsanitizer
>> --with-sysroot=/Users/townsend/devel/mesasdk-src/MacOSX10.12.sdk
>> > Thread model: posix
>> > gcc version 8.3.0 (GCC)
>> >
>> > echo $MESA_DIR gives:
>> > /Users/esandquist/codes/mesa-r11554
>> >
>> > echo $MESASDK_ROOT gives:
>> > /Applications/mesasdk
>> >
>> > echo $PATH gives:
>> >
>> /Applications/mesasdk/bin:/Users/esandquistadmin/anaconda2/bin:/opt/local/bin:/opt/local/sbin:/Users/esandquist/bin:/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python:/Library/Python/2.7/site-packages:/usr/local/sm:/usr/local/sm/bin:/opt/pgi/osx86-64/2016/bin:/Library/TeX/Root/bin/x86_64-darwin/:/sw/bin:/sw/sbin:/Users/esandquistadmin/anaconda2/bin:/opt/local/bin:/opt/local/sbin:/Applications/mesasdk/bin:/Users/esandquist/bin:/Users/esandquistadmin/anaconda2/bin:/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python:/Library/Python/2.7/site-packages:/usr/local/sm:/usr/local/sm/bin:/opt/pgi/osx86-64/2016/bin:/usr/local/gfortran:/usr/local/gfortran/bin:/Library/TeX/Root/bin/x86_64-darwin/:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Library/TeX/texbin:.:/opt/X11/bin:.
>> >
>> > --
>> > Eric Sandquist
>> > San Diego State University
>> > Office phone: 619-594-2694
>> > Web: esandquist.sdsu.edu
>> > _______________________________________________
>> > mesa-users at lists.mesastar.org
>> > https://lists.mesastar.org/mailman/listinfo/mesa-users
>> >
>>
>>
>
> --
> Eric Sandquist
> Chair, Astronomy Department
> San Diego State University
> Office phone: 619-594-2694 <(619)%20594-2694>
> Web: esandquist.sdsu.edu
>


-- 
Eric Sandquist
Chair, Astronomy Department
San Diego State University
Office phone: 619-594-2694 <(619)%20594-2694>
Web: esandquist.sdsu.edu
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