[Mesa-users] Encountering compile errors building mesa-r11554 on iMacPro
RICHARD H D TOWNSEND
townsend at astro.wisc.edu
Sat Mar 16 14:58:30 EDT 2019
Hi Sam (copying mesa-users) --
Can you confirm that the MESA SDK is initialized? What does the command
mesasdk_version.sh
report?
cheers,
Rich
> On Mar 16, 2019, at 12:00 PM, Samuel Dupree <sdupree at speakeasy.net> wrote:
>
> Rich,
>
> I removed the source statement for madsdk from my .bash_profile file, restarted the Terminal app and attempted to install MESA. I'm still getting the compile error as follows:
>
>
>
> Last login: Sat Mar 16 11:18:55 on ttys000
> (base) Samuels-Mac-Pro:~ user$ cd $MESA_DIR
> (base) Samuels-Mac-Pro:mesa-r11554 user$ ./install
>
> /Volumes/Development/AstrophysicsLib/mesa-r11554/const
> building const package.
>
> gfortran -fopenmp -ggdb -o ../tester test_const.o -L../../make -lconst
> export
> done
>
> mesa/const has been built, tested, and exported.
>
> ************************************************
>
> /Volumes/Development/AstrophysicsLib/mesa-r11554/utils
> building utils package.
>
> gfortran -Wno-uninitialized -fno-range-check -fmax-errors=7 -fprotect-parens -fno-sign-zero -fbacktrace -ggdb -finit-real=snan -fopenmp -std=f2008 -Wno-error=tabs -I../public -I../private -I../../include -I/Applications/mesasdk/include -Wunused-value -W -Wno-compare-reals -Wno-unused-parameter -fimplicit-none -O2 -c -ffree-form -x f95-cpp-input ../private/utils_nan_qp.f90
> ../private/utils_nan_qp.f90:584.27:
>
> call C_F_POINTER(C_LOC(x), ix, [2,SHAPE(x)])
> 1
> Error: Assumed-shape array 'x' at (1) cannot be an argument to the procedure 'c_loc' because it is not C interoperable
> ../private/utils_nan_qp.f90:552.27:
>
> call C_F_POINTER(C_LOC(x), ix, [2,SHAPE(x)])
> 1
> Error: Assumed-shape array 'x' at (1) cannot be an argument to the procedure 'c_loc' because it is not C interoperable
> ../private/utils_nan_qp.f90:520.27:
>
> call C_F_POINTER(C_LOC(x), ix, [2,SHAPE(x)])
> 1
> Error: Assumed-shape array 'x' at (1) cannot be an argument to the procedure 'c_loc' because it is not C interoperable
> ../private/utils_nan_qp.f90:488.27:
>
> call C_F_POINTER(C_LOC(x), ix, [2,SHAPE(x)])
> 1
> Error: Assumed-shape array 'x' at (1) cannot be an argument to the procedure 'c_loc' because it is not C interoperable
> make: *** [makefile:63: utils_nan_qp.o] Error 1
>
> /Volumes/Development/AstrophysicsLib/mesa-r11554/utils/make
> FAILED
>
>
> /Volumes/Development/AstrophysicsLib/mesa-r11554/utils
> ./build_and_test FAILED
>
>
>
> Sam Dupree.
>
>
>
> On March/16/2019 12:47:55, RICHARD H D TOWNSEND wrote:
>> Hi Sam --
>>
>> In your init scripts, you're trying to use the Mad SDK (a superset of the MESA SDK). Replace 'madsdk' by 'mesasdk', and things should work.
>>
>> cheers,
>>
>> Rich
>>
>>
>>> On Mar 16, 2019, at 11:32 AM, Samuel Dupree via Mesa-users <mesa-users at lists.mesastar.org>
>>> wrote:
>>>
>>> The outputs from the various commands are given below.
>>>
>>> Sam Dupree
>>>
>>>
>>> On March/16/2019 12:24:59, Francis Timmes wrote:
>>>
>>>> i don't know the answer to this question (rich does though),
>>>> but an error upon login is usually not a good starting position.
>>>>
>>>> it would also be useful to report the output of each of the following commands
>>>> gfortran -v
>>>>
>>> (base) Samuels-Mac-Pro:mesa-r11554 user$ gfortran -v
>>> Using built-in specs.
>>> COLLECT_GCC=gfortran
>>> COLLECT_LTO_WRAPPER=/Users/user/anaconda3/bin/../libexec/gcc/x86_64-apple-darwin11.4.2/4.8.5/lto-wrapper
>>> Target: x86_64-apple-darwin11.4.2
>>> Configured with: ./configure --prefix=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac --with-gxx-include-dir=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/gcc/include/c++ --bindir=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin --datarootdir=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/share --libdir=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib --with-gmp=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac --with-mpfr=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac --with-mpc=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac --with-isl=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac --with-cloog=/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac --with-boot-ldflags='-Wl,-headerpad_max_install_names -Wl,-L/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib -Wl,-L/usr/lib' --with-stage1-ldflags='-Wl,-headerpad_max_install_names -Wl,-L/Users/ray/mc-x64-3.5/conda-bld/gcc-4.8_1477649012852/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib -Wl,-L/usr/lib' --enable-checking=release --with-tune=generic --disable-multilib
>>> Thread model: posix
>>> gcc version 4.8.5 (GCC)
>>>
>>>> echo $MESASDK_ROOT
>>>>
>>> (base) Samuels-Mac-Pro:mesa-r11554 user$ echo $MESASDK_ROOT
>>> /Applications/mesasdk
>>>
>>>> echo $PATH
>>>>
>>> (base) Samuels-Mac-Pro:mesa-r11554 user$ echo $PATH
>>> /Users/user/anaconda3/bin:/Users/user/anaconda3/condabin:/Users/user/anaconda3/lib:/Users/user/anaconda3/include:/Applications/Julia-1.0.app/Contents/Resources/julia//bin:/Users/user/boost_1_67_0_anaconda3/include/boost:/Users/user/boost_1_67_0_anaconda3/lib:/Users/user/gnu:/Users/user/.local/bin/python3.6:/usr/local/atlas/include:/usr/local/atlas/lib:/usr/local/pcre/bin:/bin:/usr/bin:/usr/local/bin:/usr/sbin:/usr/local/sbin:/Library/Frameworks/Python.framework/Versions/3.7/bin:/Users/user/perl5/perlbrew/bin:/Users/user/perl5/perlbrew/perls/perl-5.18.4/bin:/Applications/mesasdk/bin:/Users/user/dislin/bin:/usr/local/texlive/2013/bin:/usr/include:/usr/local/include:/opt/subversion/bin:/Users/user/apache-maven-3.3.9/bin:/Applications/Absoft19.0/bin:/Applications/Absoft19.0/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/usr/local/share/dotnet:/opt/X11/bin:~/.dotnet/tools:/Library/Frameworks/Mono.framework/Versions/Current/Commands:/Applications/Xamarin
>>>
>>>> echo $MESA_DIR
>>>>
>>> (base) Samuels-Mac-Pro:mesa-r11554 user$ echo $MESA_DIR
>>> /Volumes/Development/AstrophysicsLib/mesa-r11554
>>>
>>>> fxt
>>>>
>>>>
>>>>
>>>>
>>>>> On Mar 16, 2019, at 9:16 AM, Samuel Dupree <sdupree at speakeasy.net>
>>>>> wrote:
>>>>>
>>>>> Do I need to use both the MESA SDK, mesasdk and the SDK used to install Gyre, madsdk, to install MESA? If so, is there a version that is compatible with Mac OS X Mojave?
>>>>>
>>>>> Sam Dupree.
>>>>>
>>>>> On March/16/2019 11:47:44, Francis Timmes wrote:
>>>>>
>>>>>>> Last login: Sat Mar 16 11:18:27 on ttys000
>>>>>>> -bash: /Applications/madsdk/bin/madsdk_init.sh: No such file or directory
>>>>>>>
>>>>>> resolving this error, which is in your setup, may help.
>>>>>>
>>>>>> fxt
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>> On Mar 16, 2019, at 8:39 AM, Samuel Dupree via Mesa-users <mesa-users at lists.mesastar.org>
>>>>>>> wrote:
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> I'm attempting to install the current version of MESA, mesa-r11554, on an iMacPro running MAC OS X 10.14.3, Mojave. The SDK I downloaded and installed from mesasdk-x86_64-osx-10.12-10.14-20190315.dmg. The compile errors I'm getting at present are captured in the attached file.
>>>>>>>
>>>>>>> In looking through the FAQ's list, I haven't seen any comments resolving this problem. Have any updates to the mesa_r11554 release been posted?
>>>>>>>
>>>>>>> Please advise.
>>>>>>>
>>>>>>> <Installation_of_mesa_411554_output.txt>_______________________________________________
>>>>>>>
>>>>>>> mesa-users at lists.mesastar.org
>>>>>>> https://lists.mesastar.org/mailman/listinfo/mesa-users
>>>>>>>
>>>>>>>
>>>>>>>
>>>>
>>> _______________________________________________
>>>
>>> mesa-users at lists.mesastar.org
>>> https://lists.mesastar.org/mailman/listinfo/mesa-users
>>>
>>>
>>>
>>
>>
>>
> --
> <IYA-2009.jpg> <mmb_emblem-2.gif>
> Samuel H. Dupree, Jr. sdupree at speakeasy.net
> 10501 Rising Ridge Road
> Apartment 201 http://users.speakeasy.net/~sdupree/
> Fredericksburg, VA 22407, USA
>
> HOME: 540-693-1240 WORK: 540-653-6509 FAX: 866-514-9629
>
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