[Mesa-users] Installation r11701 getting stuck on kap data

[Jacqueline Den Hartogh]

Thanks Frank for the suggestion and Warrick for confirming the build set-up
is looking ok!

I'll get in touch with the support team and let you know if the storage
space is indeed the issue.

Best,
Jacqueline

On Thu, 4 Jul 2019 at 15:49, Warrick Ball <W.H.Ball at bham.ac.uk> wrote:

> Hi Jacqueline,
>
> Just wanted to add that the non-reproducibility is probably because in
> trying to decompress `kap_data.tar.xz`, `xz` has created `kap_data.tar`.
> When the build script runs again, `xz` doesn't want to overwrite the
> (unsuccessfully) decompressed file.  I expect deleting
> `$MESA_DIR/kap/kap_data.tar` will allow you to reproduce the first error.
>
> FWIW, everything else in your build setup looks correct so I agree with
> Frank to check things like disk space.  On our University cluster, we only
> get ~20GB in $HOME, which wouldn't be enough for MESA.
>
> Cheers,
> Warrick
>
>
> ------------
> Warrick Ball
> Postdoc, School of Physics and Astronomy
> University of Birmingham, Edgbaston, Birmingham B15 2TT
> W.H.Ball at bham.ac.uk
> +44 (0)121 414 4552
>
>
> On Thu, 4 Jul 2019, mesa-users at lists.mesastar.org wrote:
>
> > hi jacqueline,
> >
> >
> >> xz -d kap_data.tar.xz
> >> xz: kap_data.tar: Cannot set the file group: Invalid argument
> >
> > this is the one to resolve.
> > you're on a cluster and presumably attempting the build on the head node.
> >
> > perhaps you are running out disk space on the head node?
> > a mesa install will consume ~20 gb, with chunk of that in the eos data,
> > so maybe its not a surprise the fail occurs after the eos portion is
> built.
> >
> > fxt
> >
> >
> >
> >
> >
> >> On Jul 3, 2019, at 8:27 PM, Jacqueline Den Hartogh via Mesa-users <
> mesa-users at lists.mesastar.org> wrote:
> >>
> >> Dear all,
> >>
> >> I am trying to install mesa r11701 with mesa sdk, the version of early
> May this year. The installation stops at the kap-folder. See below for the
> error, which I cannot reproduce, and the second error that I can reproduce.
> I have attached the full build log, which includes the environmental
> variables.
> >> The machine I am using is a SGI ICE8400EX (the 'debrecen' machine
> described here:https://wiki.niif.hu/index.php?title=NIIF_HPC_(English)),
> but it's a little outdated and won't be updated anymore. I hope this isn't
> the problem.
> >> I have not been able to find a similar issue on the mesa archive.
> >>
> >> Thanks for your help!
> >>
> >> Jacqueline
> >>
> >>
> >> After I unzip the mesa folder, clean the folder, and then compile mesa,
> this message pops up:
> >> FC ../ceos
> >>
> >> mesa/eos has been built, tested, and exported.
> >>
> >> ************************************************
> >>
> >> /home/mavfoe2/mesa-r11701/kap
> >> installing mesa kap data.
> >>
> >> create kap_data
> >> xz -d kap_data.tar.xz
> >> xz: kap_data.tar: Cannot set the file group: Invalid argument
> >>
> >>
> >> I am unable to reproduce this error. When I try to compile mesa a
> second time (after ./clean), I get this message:
> >> FC ../ceos
> >>
> >> mesa/eos has been built, tested, and exported.
> >>
> >> ************************************************
> >>
> >> /home/mavfoe2/mesa-r11701/kap
> >> installing mesa kap data.
> >>
> >> create kap_data
> >> xz -d kap_data.tar.xz
> >> xz: kap_data.tar: File exists
> >>
> >> And this error remains after I clean and compile again.
> >> I then tried to proceed further by cleaning and compiling the kap
> folder, and then recompiling the mesa folder (without ./clean):
> >> DEBRECEN[service0] ~/mesa-r11701 (0)$ cd kap
> >> DEBRECEN[service0] ~/mesa-r11701/kap (0)$ ./clean
> >> DEBRECEN[service0] ~/mesa-r11701/kap (0)$ ./mk
> >> MAKEDEPF90
> >> COMPILE_CMD ../public/kap_def.f90
> >> COMPILE_CMD ../private/cubic_interpolator.f90
> >> COMPILE_CMD ../private/op_def.f90
> >> COMPILE_LEGACY_NOCHECKS ../private/op_load.f
> >> COMPILE_LEGACY_NOCHECKS ../private/op_common.f
> >> COMPILE_LEGACY_NOCHECKS ../private/op_ev.f
> >> COMPILE_LEGACY_NOCHECKS ../private/op_osc.f
> >> COMPILE_LEGACY_NOCHECKS ../private/op_radacc.f
> >> COMPILE_NO_CHECKS ../private/op_eval.f
> >> COMPILE_CMD ../private/kap_eval_support.f90
> >> COMPILE_CMD ../private/condint.f90
> >> COMPILE_CMD ../private/load_co_kap.f90
> >> COMPILE_CMD ../private/kap_aesopus.f90
> >> COMPILE_CMD ../private/kapcn.f90
> >> COMPILE_CMD ../private/load_kap.f90
> >> COMPILE_CMD ../private/kap_eval_fixed.f90
> >> COMPILE_CMD ../private/kap_eval_co.f90
> >> COMPILE_CMD ../private/kap_eval.f90
> >> COMPILE_CMD ../public/kap_lib.f90
> >> LIB_TOOL libkap.a
> >>
> >> But this gave me the same error again.
> >>
> >>
> >> <build.txt>_______________________________________________
> >> mesa-users at lists.mesastar.org
> >> https://lists.mesastar.org/mailman/listinfo/mesa-users
> >>
> >
> > _______________________________________________
> > mesa-users at lists.mesastar.org
> > https://lists.mesastar.org/mailman/listinfo/mesa-users
> >
> >
>
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