[Mesa-users] FW: Installation problem: rates build_and_test failed

[Rob Farmer]

Hi Liza,

> I've fixed the error with my C compiled, but now I get this:

Just a question, what was the problem and how did you fix it?

> (is there a way to make sure it doesn’t just reply one person?)

Just make sure to click reply-all when sending the email

Rob

On 12 March 2018 at 13:30, RICHARD H D TOWNSEND via Mesa-users <
mesa-users at lists.mesastar.org> wrote:

> Hi Liza --
>
> One other thing to try: can you post the output of the following two
> commands:
>
> ldd $MESA_DIR/rates/test/test_quietly
>
> echo $LD_LIBRARY_PATH
>
> cheers,
>
> Rich
>
> > On Mar 12, 2018, at 7:07 AM, Liza Sazonova via Mesa-users <
> mesa-users at lists.mesastar.org> wrote:
> >
> > Hello everyone,
> >
> > I am still trying to fix the problem – and I just realized that somehow
> I started replying directly to Richard rather than to the entire mailing
> list (is there a way to make sure it doesn’t just reply one person?)
> > Anyway, any help would be appreciated!
> >
> > Thank you,
> > Liza
> >
> > From: Liza Sazonova
> > Sent: Friday, March 9, 2018 6:49:46 PM
> > To: RICHARD H D TOWNSEND
> > Subject: Re: [Mesa-users] Installation problem: rates build_and_test
> failed
> >
> > Hi Rich,
> >
> > That didn't seem to fix it, I'm getting the same error unfortunately.
> >
> > Cheers,
> > Liza
> > From: RICHARD H D TOWNSEND <townsend at astro.wisc.edu>
> > Sent: Friday, March 9, 2018 6:41:23 PM
> > To: Liza Sazonova
> > Subject: Re: [Mesa-users] Installation problem: rates build_and_test
> failed
> >
> >
> > Hi Liza --
> >
> > Thanks for the info. Everything looks good here, so I was probably wrong!
> >
> > An alternative suggestion: try running './clean' in the $MESA_DIR
> directory, prior to running './install'.
> >
> > cheers,
> >
> > Rich
> >
> > > On Mar 9, 2018, at 5:36 PM, Liza Sazonova <esazono1 at jhu.edu> wrote:
> > >
> > > Here are all of them:
> > >
> > > saifa at Liza-Ubuntu:~/Documents/mesa-r10108$ which gcc
> > > /home/saifa/mesasdk/bin/gcc
> > >
> > > saifa at Liza-Ubuntu:~/Documents/mesa-r10108$ gcc -v
> > > Using built-in specs.
> > > COLLECT_GCC=/home/saifa/mesasdk/bin/gcc.exec
> > > COLLECT_LTO_WRAPPER=/home/saifa/mesasdk/bin/../libexec/
> gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
> > > Target: x86_64-pc-linux-gnu
> > > Configured with: /root/mesasdk-src/gcc/configure CC=gcc
> --build=x86_64-pc-linux-gnu --prefix=/root/mesasdk --with-gmp=/root/mesasdk
> --with-mpfr=/root/mesasdk --with-mpc=/root/mesasdk --enable-languages=c,c++,fortran
> --disable-multilib --disable-nls --disable-libsanitizer
> --enable-clocale=generic
> > > Thread model: posix
> > > gcc version 7.2.0 (GCC)
> > >
> > > saifa at Liza-Ubuntu:~/Documents/mesa-r10108$ which gfortran
> > > /home/saifa/mesasdk/bin/gfortran
> > >
> > > saifa at Liza-Ubuntu:~/Documents/mesa-r10108$ gfortran -v
> > > Using built-in specs.
> > > COLLECT_GCC=/home/saifa/mesasdk/bin/gfortran.exec
> > > COLLECT_LTO_WRAPPER=/home/saifa/mesasdk/bin/../libexec/
> gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
> > > Target: x86_64-pc-linux-gnu
> > > Configured with: /root/mesasdk-src/gcc/configure CC=gcc
> --build=x86_64-pc-linux-gnu --prefix=/root/mesasdk --with-gmp=/root/mesasdk
> --with-mpfr=/root/mesasdk --with-mpc=/root/mesasdk --enable-languages=c,c++,fortran
> --disable-multilib --disable-nls --disable-libsanitizer
> --enable-clocale=generic
> > > Thread model: posix
> > > gcc version 7.2.0 (GCC)
> > >
> > > saifa at Liza-Ubuntu:~/Documents/mesa-r10108$ mesasdk_hdf5_link
> > > -L/home/saifa/mesasdk/lib -lhdf5_fortran -lhdf5 -lz
> > >
> > > Thanks!
> > > Liza
> > >
> > >
> > > From: RICHARD H D TOWNSEND <townsend at astro.wisc.edu>
> > > Sent: Friday, March 9, 2018 6:31:26 PM
> > > To: Liza Sazonova
> > > Cc: Liza Sazonova via Mesa-users
> > > Subject: Re: [Mesa-users] Installation problem: rates build_and_test
> failed
> > >
> > >
> > > Hi Liza --
> > >
> > > Can you run the following commands, and post the output:
> > >
> > > which gcc
> > > gcc -v
> > >
> > > which gfortran
> > > gfortran -v
> > >
> > > mesasdk_hdf5_link
> > >
> > > cheers,
> > >
> > > Rich
> > >
> > > > On Mar 9, 2018, at 5:26 PM, Liza Sazonova <esazono1 at jhu.edu> wrote:
> > > >
> > > > Hi Rich,
> > > >
> > > > Thanks for the fast response!
> > > > I've followed all steps in http://www.astro.wisc.edu/~
> townsend/static.php?ref=mesasdk
> > > > so it should be installed properly, I don't immediately see anything
> wrong with it at least. Is there something I can check to see what can the
> problem with my sdk be?
> > > >
> > > >
> > > > From: RICHARD H D TOWNSEND <townsend at astro.wisc.edu>
> > > > Sent: Friday, March 9, 2018 6:15:19 PM
> > > > To: Liza Sazonova; Liza Sazonova via Mesa-users
> > > > Subject: Re: [Mesa-users] Installation problem: rates build_and_test
> failed
> > > >
> > > >
> > > > Hi Liza --
> > > >
> > > > I'm guessing the MESA SDK isn't properly installed.
> > > >
> > > > cheers,
> > > >
> > > > Rich
> > > >
> > > > > On Mar 9, 2018, at 4:57 PM, Liza Sazonova via Mesa-users <
> mesa-users at lists.mesastar.org> wrote:
> > > > >
> > > > > Hi all,
> > > > >
> > > > > I am trying to reinstall MESA after updating Ubuntu and I keep
> getting installation issues.
> > > > > I've fixed the error with my C compiled, but now I get this:
> > > > >
> > > > >  -lmtx -lconst -lutils `mesasdk_lapack_link` `mesasdk_blas_link`
> `mesasdk_hdf5_link`
> > > > > ../utils/build_and_test_parallel: line 56:  7588 Aborted
>        (core dumped) ./test_quietly &> test_quietly.txt
> > > > > /home/saifa/Documents/mesa-r10108/rates/test
> > > > > FAILED
> > > > > /home/saifa/Documents/mesa-r10108/rates
> > > > > ./build_and_test FAILED
> > > > >
> > > > > There is no tmp.txt file in my rates/test folder. I attached the
> output from ./tester 2>&1 | tee tester.log
> > > > > Thank you in advance!
> > > > >
> > > > > Best regards,
> > > > > Liza Sazonova
> > > > >
> > > > >
> > > > >
> > > > > <tester.log>_______________________________________________
> > > > > mesa-users at lists.mesastar.org
> > > > > https://lists.mesastar.org/mailman/listinfo/mesa-users
> >
> >
> > _______________________________________________
> > mesa-users at lists.mesastar.org
> > https://lists.mesastar.org/mailman/listinfo/mesa-users
>
> _______________________________________________
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