[Mesa-users] ./build_and_test FAILED for eos
Marcel Agüeros
marcel at astro.columbia.edu
Thu Feb 22 12:52:59 EST 2018
Hi Rob--
it did fail, and after I ran ./tester I got the
attached run.log file.
Take care,
Marcel.
On Thu, 22 Feb 2018, Rob Farmer wrote:
> Hi Marcel,
>
> Can you put this file inside $MESA_DIR/utils/public and then do:
>
> cd $MESA_DIR
> ./clean
> ./install
>
> if/when mesa fails do:
>
> cd $MESA_DIR/eos/test
> rm $MESA_DIR/data/eos*/cache/*
> ./mk
> ./tester | tee run.log
>
> Thanks
> Rob
>
>
>
> On 22 February 2018 at 13:21, Marcel Ag\FCeros <marcel at astro.columbia.edu>
> wrote:
>
> \A0 \A0 \A0 \A0 Hi Aaron--
> \A0 \A0 \A0 \A0 sorry, it was late last night and I wasn't paying
> attention to the terminals--
>
> gfortran -v returns
> Using built-in specs.
> COLLECT_GCC=/home/marcel/Desktop/mesasdk/bin/gfortran.exec
> COLLECT_LTO_WRAPPER=/home/marcel/Desktop/mesasdk/bin/../libexec/gcc/x86_64-
> pc-linux-gnu/7.2.0/lto-wrapper
> Target: x86_64-pc-linux-gnu
> Configured with: /root/mesasdk-src/gcc/configure CC=gcc
> --build=x86_64-pc-linux-gnu --prefix=/root/mesasdk
> --with-gmp=/root/mesasdk --with-mpfr=/root/mesasdk
> --with-mpc=/root/mesasdk --enable-languages=c,c++,fortran
> --disable-multilib --disable-nls --disable-libsanitizer
> --enable-clocale=generic
> Thread model: posix
> gcc version 7.2.0 (GCC)
>
> which gfortran
> /home/marcel/Desktop/mesasdk/bin/gfortran
>
> \A0 \A0 \A0 \A0 Take care,
> \A0 \A0 \A0 \A0 Marcel.
>
> On Wed, 21 Feb 2018, Aaron Dotter wrote:
>
> > Hi Marcel,
> >\A0 \A0 \A0 \A0 \A0 \A0 \A0what version of the mesasdk are you using?
> >
> >\A0 \A0 \A0 \A0mesasdk-x86_64-linux-20180127.tar.gz
> >
> > \A0
> >\A0 \A0 \A0 \A0gcc version 5.4.0 20160609 (Ubuntu
> 5.4.0-6ubuntu1~16.04.9)
> >
> >
> > Somehow or other you're getting the system-installed
> gfortran.\A0 You can compare the dates (SDK: 20180127 vs.
> 20160609) in the lines above.
> >
> > You should be able to confirm this by typting 'which
> gfortran'.\A0 Just out of curiosity, are you using more than one
> terminal window?\A0 And have
> > they all been sourced properly?
> >
> >
> > Aaron
> >
>
> ------------------------------------------------------------------
> Marcel Ag\FCeros
> Associate Professor, Department of Astronomy
> Columbia University
> Mail Code 5246
> 550 W120 Street
> NY, NY 10027
> 1 212 854 6814
> ------------------------------------------------------------------
> _______________________________________________
> mesa-users at lists.mesastar.org
> https://lists.mesastar.org/mailman/listinfo/mesa-users
-------------- next part --------------
read ../../data/eosDT_data/helm_table.dat
write ../../data/eosDT_data/cache/helm_table.bin
pure Helium
X 0.0000000000000000E+00
Y 1.0000000000000000E+00
Z 0.0000000000000000E+00
abar 4.0000000000000000E+00
zbar 2.0000000000000000E+00
logRho -7.9999999999999991E+00
logT 2.0000000000000000E+00
T6 9.9999999999999991E-05
eosDT_ideal_gas_get
P 2.0786181430242777E+01
E 3.1179271767075791E+09
S 4.8269426244237024E+08
mu 1.3333333333333333E+00
lnfree_e -2.6429014357643729E+02
eta 0.0000000000000000E+00
grad_ad 3.9999999999999997E-01
chiRho 9.9999999999999989E-01
chiT 9.9999999999999989E-01
gamma1 1.6666666666666663E+00
gamma3 1.6666666666666665E+00
eta 0.0000000000000000E+00
X 0.0000000000000000E+00
Y 1.0000000000000000E+00
Z 0.0000000000000000E+00
abar 4.0000000000000000E+00
zbar 2.0000000000000000E+00
logRho -1.9999999999999998E+00
logT 6.0000000000000000E+00
T6 1.0000000000000000E+00
write ../../data/eosDT_data/cache/mesa-eosDT_00z00x.bin
eosDT_get
P 6.2100856972168835E+11
E 1.1185910819718380E+14
S 8.9350241827694988E+08
mu 1.3343972521458241E+00
lnfree_e -7.1083451678046217E-01
eta -7.3977387711538496E+00
grad_ad 3.9338990092561160E-01
chiRho 9.9219792776402393E-01
chiT 1.0236392928385578E+00
gamma1 1.6610966342180364E+00
gamma3 1.6534556328239336E+00
eta -7.3977387711538496E+00
X 0.0000000000000000E+00
Y 1.0000000000000000E+00
Z 0.0000000000000000E+00
abar 4.0000000000000000E+00
zbar 2.0000000000000000E+00
logRho -9.9999999999999989E-01
logT 4.0000000000000000E+00
T6 1.0000000000000000E-02
eosDT_get
P 2.3440634573327656E+10
E 3.2446133432181909E+11
S 2.8977788032200122E+08
mu 4.0000007737813874E+00
lnfree_e -9.2103403719761818E+00
eta -2.0000000000000000E+01
grad_ad 3.9197054769106948E-01
chiRho 1.1192461048209492E+00
chiT 9.4195159087688363E-01
gamma1 1.7666744682116600E+00
gamma3 1.6924793542208876E+00
eta -2.0000000000000000E+01
X 0.0000000000000000E+00
Y 1.0000000000000000E+00
Z 0.0000000000000000E+00
abar 4.0000000000000000E+00
zbar 2.0000000000000000E+00
logRho -9.9999999999999989E-01
logT 5.0000000000000000E+00
T6 9.9999999999999992E-02
eosDT_get
P 3.2383932610064630E+11
E 9.4473235426827480E+12
S 4.7301040764836442E+08
mu 1.9473573566866678E+00
lnfree_e -1.3207182576098044E+00
eta -2.2140136870353802E+00
grad_ad 2.5815798177346022E-01
chiRho 8.8670604922952445E-01
chiT 1.4448369312027372E+00
gamma1 1.4141864668291979E+00
gamma3 1.3650780037467394E+00
eta -2.2140136870353802E+00
X 0.0000000000000000E+00
Y 1.0000000000000000E+00
Z 0.0000000000000000E+00
abar 4.0000000000000000E+00
zbar 2.0000000000000000E+00
logRho 2.0000000000000000E+00
logT 8.3010299956639795E+00
T6 2.0000000000000000E+02
eosDT_get
P 5.2823655156489667E+18
E 1.4026765731697099E+17
S 1.6268287474914486E+09
mu 1.3333333333333333E+00
lnfree_e -6.9314718006178755E-01
eta -6.1787884971915199E+00
grad_ad 2.5150709373602886E-01
chiRho 2.3616270791798244E-01
chiT 3.2915905976973998E+00
gamma1 1.3719094474168758E+00
gamma3 1.3450449579888197E+00
eta -6.1787884971915199E+00
pure Hydrogen
X 1.0000000000000000E+00
Y 0.0000000000000000E+00
Z 0.0000000000000000E+00
abar 1.0000000000000000E+00
zbar 1.0000000000000000E+00
logRho -7.9999999999999991E+00
logT 2.0000000000000000E+00
T6 9.9999999999999991E-05
eosDT_ideal_gas_get
P 4.1572362608293311E+01
E 6.2358543534151478E+09
S 8.9334911049387252E+08
mu 5.0000000000000000E-01
lnfree_e -2.6429014357643729E+02
eta 0.0000000000000000E+00
grad_ad 3.9999999999999997E-01
chiRho 9.9999999999999989E-01
chiT 9.9999999999999989E-01
gamma1 1.6666666666666663E+00
gamma3 1.6666666666666665E+00
eta 0.0000000000000000E+00
X 1.0000000000000000E+00
Y 0.0000000000000000E+00
Z 0.0000000000000000E+00
abar 1.0000000000000000E+00
zbar 1.0000000000000000E+00
logRho -1.9999999999999998E+00
logT 6.0000000000000000E+00
T6 1.0000000000000000E+00
write ../../data/eosDT_data/cache/mesa-eosDT_00z100x.bin
eosDT_get
P 1.6452763736487673E+12
E 2.6126912752916116E+14
S 2.3899971145226893E+09
mu 5.0400000000000000E-01
lnfree_e -2.6966512826265832E-02
eta -6.7136714712734875E+00
grad_ad 3.9710110601787074E-01
chiRho 9.9636239443268282E-01
chiT 1.0110590892772364E+00
gamma1 1.6647444858742686E+00
gamma3 1.6610686053057058E+00
eta -6.7136714712734875E+00
X 1.0000000000000000E+00
Y 0.0000000000000000E+00
Z 0.0000000000000000E+00
abar 1.0000000000000000E+00
zbar 1.0000000000000000E+00
logRho -9.9999999999999989E-01
logT 4.0000000000000000E+00
T6 1.0000000000000000E-02
eosDT_get
P 6.9084070757562653E+10
E 1.8861617688433232E+12
S 9.1014778380461836E+08
mu 1.3477398922872366E+00
lnfree_e -7.7424749221373546E+00
eta -1.6593753447884122E+01
grad_ad 2.2741113591255288E-01
chiRho 1.2436975923257043E+00
chiT 1.1782005930283312E+00
gamma1 1.6915540427454954E+00
gamma3 1.3846744062743606E+00
eta -1.6593753447884122E+01
X 1.0000000000000000E+00
Y 0.0000000000000000E+00
Z 0.0000000000000000E+00
abar 1.0000000000000000E+00
zbar 1.0000000000000000E+00
logRho -9.9999999999999989E-01
logT 5.0000000000000000E+00
T6 9.9999999999999992E-02
eosDT_get
P 1.2385332673509253E+12
E 2.4388385774716281E+13
S 1.4600490057583487E+09
mu 7.2181713563159522E-01
lnfree_e -3.7774616224178076E-01
eta -1.2132438790845261E+00
grad_ad 3.6117444052541570E-01
chiRho 9.6642435620801725E-01
chiT 1.2770934029069720E+00
gamma1 1.7938621097381109E+00
gamma3 1.6479051986892037E+00
eta -1.2132438790845261E+00
X 1.0000000000000000E+00
Y 0.0000000000000000E+00
Z 0.0000000000000000E+00
abar 1.0000000000000000E+00
zbar 1.0000000000000000E+00
logRho 2.0000000000000000E+00
logT 8.3010299956639795E+00
T6 2.0000000000000000E+02
eosDT_get
P 7.3618664040326717E+18
E 1.7196935095663690E+17
S 3.0137672694581814E+09
mu 5.0000000000000000E-01
lnfree_e 4.9815729306983226E-10
eta -5.4849312910278769E+00
grad_ad 2.5713263279759419E-01
chiRho 4.5204327295709312E-01
chiT 2.6440960892553291E+00
gamma1 1.4121206371097470E+00
gamma3 1.3631022972478453E+00
eta -5.4849312910278769E+00
mixed Z with H&He 3:1 ratio
X 7.2750000000000004E-01
Y 2.4249999999999994E-01
Z 2.9999999999999999E-02
abar 1.2658784082055623E+00
zbar 1.0934024750875544E+00
logRho -7.9999999999999991E+00
logT 2.0000000000000000E+00
T6 9.9999999999999991E-05
eosDT_ideal_gas_get
P 3.5437552954969995E+01
E 5.3156329054166489E+09
S 7.7566330522210610E+08
mu 6.0469901190530417E-01
lnfree_e -2.6429014357643729E+02
eta 0.0000000000000000E+00
grad_ad 4.0000000000000002E-01
chiRho 9.9999999999999989E-01
chiT 9.9999999999999989E-01
gamma1 1.6666666666666665E+00
gamma3 1.6666666666666665E+00
eta 0.0000000000000000E+00
X 7.2750000000000004E-01
Y 2.4249999999999994E-01
Z 2.9999999999999999E-02
abar 1.2658784082055623E+00
zbar 1.0934024750875544E+00
logRho -1.9999999999999998E+00
logT 6.0000000000000000E+00
T6 1.0000000000000000E+00
write ../../data/eosDT_data/cache/mesa-eosDT_02z60x.bin
write ../../data/eosDT_data/cache/mesa-eosDT_02z40x.bin
write ../../data/eosDT_data/cache/mesa-eosDT_02z80x.bin
write ../../data/eosDT_data/cache/mesa-eosDT_04z40x.bin
write ../../data/eosDT_data/cache/mesa-eosDT_04z60x.bin
write ../../data/eosDT_data/cache/mesa-eosDT_04z80x.bin
mv failed for './.mesa_temp_cache/eosDT_cache/mesa-eosDT_04z80x.bin' '../../data/eosDT_data/cache/mesa-eosDT_04z80x.bin'
exitstat = 0
cmdstat = 1
cmdmsg = 'Termination status of the command-language interpreter cannot be obtained'
File: ../public/utils_lib.f, Line: 855
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