[Mesa-users] MESA-r10398 installation problem

Thu Dec 27 19:15:47 EST 2018

Thank you Evan.

Yes, I did not see that. Now it works perfectly !!

Thanks
Abdel

________________________________
From: Evan Bauer <ebauer at physics.ucsb.edu>
Sent: Wednesday, December 26, 2018 11:58:36 AM
To: AbdelBassit Abdessamed Senhadji
Cc: mesa-users at lists.mesastar.org
Subject: Re: [Mesa-users] MESA-r10398 installation problem

Hi Abdel,

You appear to have some inconsistency in how MESA_DIR and MESASDK_ROOT are set. Some parts of the output show them in /home/sena2703/scratch/, while other parts show them in /home/sena2703/. I’d recommend making sure those get set consistently, then trying a top level ./clean and ./install.

Evan

On Dec 25, 2018, at 10:50 AM, AbdelBassit Abdessamed Senhadji <sen-abd at hotmail.fr<mailto:sen-abd at hotmail.fr>> wrote:

Hi All:

I tried to upgrade to mesa-r10398 and used two different versions of mesasdk:mesasdk-x86_64-linux-20180127.tar.gz<https://eur02.safelinks.protection.outlook.com/?url=http:%2F%2Fwww.astro.wisc.edu%2F~townsend%2Fresource%2Fdownload%2Fmesasdk%2Fmesasdk-x86_64-linux-20180127.tar.gz&data=02%7C01%7C%7Cdb7994c0c6e04d76f39308d66b5362b1%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C636814403221081191&sdata=877oVeNFeb%2B3%2FKgydMv2l9S0L1cA7zrVI0QZEyOnLyk%3D&reserved=0> and mesasdk-x86_64-linux-20180822.tar.gz<https://eur02.safelinks.protection.outlook.com/?url=http:%2F%2Fwww.astro.wisc.edu%2F~townsend%2Fresource%2Fdownload%2Fmesasdk%2Fmesasdk-x86_64-linux-20180127.tar.gz&data=02%7C01%7C%7Cdb7994c0c6e04d76f39308d66b5362b1%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C636814403221081191&sdata=877oVeNFeb%2B3%2FKgydMv2l9S0L1cA7zrVI0QZEyOnLyk%3D&reserved=0>

I am facing the same problem. I’ve copied the error message. Is it due to gfortran version or crlibm ?

For gfortran I have the 7.2.0 version not 7.3.0 as said in the mesasdk website.

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
make: 'libf2crlibm.a' is up to date.
gfortran -Wno-uninitialized -fno-range-check -fmax-errors=12  -fprotect-parenfno-sign-zero -fbacktrace -ggdb -finit-real=snan -fopenmp -I../../make -I../.ublic -I../../../include -fbounds-check -Wuninitialized -Warray-bounds  -c -fe-form -x f95-cpp-input ../src/test_crlibm.f
gfortran -fopenmp -o ../tester test_crlibm.o \
-L../../make -lf2crlibm -lcrlibm -L../../../lib -lutils -lconst

FAILED

/home/sena2703/scratch/dec_2018/mesa/crlibm/test
./build_and_test FAILED

/home/sena2703/scratch/dec_2018/mesa/crlibm
./build_and_test FAILED
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

[sena2703 at ip19-mp2 mesa]$ uname -a
Linux ip19 3.10.0-862.3.2.el7.x86_64 #1 SMP Mon May 21 23:36:36 UTC 2018 x86_64 GNU/Linux

[sena2703 at ip19-mp2 mesa]$ gfortran -v
Using built-in specs.
COLLECT_GCC=/home/sena2703/mesasdk/bin/gfortran.exec
COLLECT_LTO_WRAPPER=/home/sena2703/mesasdk/bin/../libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
Target: x86_64-pc-linux-gnu
Configured with: /root/mesasdk-src/gcc/configure CC=gcc --build=x86_64-pc-linux-gnu --prefix=/root/mesasdk --with-gmp=/root/mesasdk --with-mpfr=/root/mesasdk --with-mpc=/root/mesasdk --enable-languages=c,c++,fortran --disable-multilib --disable-nls --disable-libsanitizer --enable-clocale=generic
Thread model: posix
gcc version 7.2.0 (GCC)

[sena2703 at ip19-mp2 mesa]$ echo $PATH
/home/sena2703/mesasdk/bin:/home/sena2703/scratch/dec_2018/mesasdk/bin:/opt/software/slurm/bin:/cvmfs/soft.computecanada.ca/easybuild/software/2017/sse3/Compiler/intel2016.4/openmpi/2.1.1/bin:/cvmfs/soft.computecanada.ca/easybuild/software/2017/Core/imkl/11.3.4.258/mkl/bin:/cvmfs/soft.computecanada.ca/easybuild/software/2017/Core/imkl/11.3.4.258/bin:/cvmfs/soft.computecanada.ca/easybuild/software/2017/Core/ifort/2016.4.258/compilers_and_libraries_2016.4.258/linux/bin/intel64:/cvmfs/soft.computecanada.ca/nix/var/nix/profiles/gcc-5.4.0/bin:/cvmfs/soft.computecanada.ca/easybuild/software/2017/Core/icc/2016.4.258/compilers_and_libraries_2016.4.258/linux/bin/intel64:/cvmfs/soft.computecanada.ca/easybuild/bin:/cvmfs/soft.computecanada.ca/custom/bin:/cvmfs/soft.computecanada.ca/nix/var/nix/profiles/16.09/bin:/cvmfs/soft.computecanada.ca/nix/var/nix/profiles/16.09/sbin:/usr/lib64/qt-3.3/bin:/opt/software/bqtools/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/sena2703/.local/bin:/home/sena2703/bin<https://eur02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fsoft.computecanada.ca%2Feasybuild%2Fsoftware%2F2017%2Fsse3%2FCompiler%2Fintel2016.4%2Fopenmpi%2F2.1.1%2Fbin%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Feasybuild%2Fsoftware%2F2017%2FCore%2Fimkl%2F11.3.4.258%2Fmkl%2Fbin%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Feasybuild%2Fsoftware%2F2017%2FCore%2Fimkl%2F11.3.4.258%2Fbin%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Feasybuild%2Fsoftware%2F2017%2FCore%2Fifort%2F2016.4.258%2Fcompilers_and_libraries_2016.4.258%2Flinux%2Fbin%2Fintel64%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Fnix%2Fvar%2Fnix%2Fprofiles%2Fgcc-5.4.0%2Fbin%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Feasybuild%2Fsoftware%2F2017%2FCore%2Ficc%2F2016.4.258%2Fcompilers_and_libraries_2016.4.258%2Flinux%2Fbin%2Fintel64%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Feasybuild%2Fbin%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Fcustom%2Fbin%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Fnix%2Fvar%2Fnix%2Fprofiles%2F16.09%2Fbin%3A%2Fcvmfs%2Fsoft.computecanada.ca%2Fnix%2Fvar%2Fnix%2Fprofiles%2F16.09%2Fsbin%3A%2Fusr%2Flib64%2Fqt-3.3%2Fbin%3A%2Fopt%2Fsoftware%2Fbqtools%2Fbin%3A%2Fusr%2Flocal%2Fbin%3A%2Fusr%2Fbin%3A%2Fusr%2Flocal%2Fsbin%3A%2Fusr%2Fsbin%3A%2Fhome%2Fsena2703%2F.local%2Fbin%3A%2Fhome%2Fsena2703%2Fbin&data=02%7C01%7C%7Cdb7994c0c6e04d76f39308d66b5362b1%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C636814403221081191&sdata=mNYpM2LvetksbbmR5Dhb%2BpZwQjb0d0tuictRplgQZ9k%3D&reserved=0>

[sena2703 at ip19-mp2 mesa]$ echo $MESA_DIR
/home/sena2703/scratch/dec_2018/mesa

Any help will be appreciated !

Happy holidays!

Cheers,
Abdel

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