[Mesa-users] Running MESA on Condor systems

Pablo Marchant pamarca at gmail.com
Wed Oct 25 11:55:09 EDT 2017


And as a workaround, can you manually compile mesa in the condor nodes? I
get the feeling from what you say that for every mesa run you're doing
you're locally recompiling mesa and then compiling your work folder and
doing your simulation. Or are you first setting a bunch of jobs to locally
install mesa, and plan afterwards to queue the jobs doing the actual
simulations?

Cheers

On Oct 25, 2017 10:26 AM, "Francis Timmes via Mesa-users" <
mesa-users at lists.mesastar.org> wrote:

> maybe an issue with running on a head node (not enough memory) or
> maybe getting $OMP_NUM_THREADS to condor
> http://cococubed.asu.edu/mesa_market/condor.html ?
>
> fxt
>
>
>
> > On Oct 25, 2017, at 7:42 AM, RICHARD H D TOWNSEND via Mesa-users <
> mesa-users at lists.mesastar.org> wrote:
> >
> > Yes, I am.
> >
> >> On Oct 25, 2017, at 9:38 AM, Pablo Marchant <pamarca at gmail.com> wrote:
> >>
> >> Are you installing MESA through condor?
> >>
> >> When I've used condor It's been with multiple machines or nodes that do
> not require recompiling anything, I simply compile mesa and my
> corresponding work folder once and then run it.
> >>
> >> Cheers
> >>
> >> On Wed, Oct 25, 2017 at 8:45 AM, RICHARD H D TOWNSEND via Mesa-users <
> mesa-users at lists.mesastar.org> wrote:
> >> Yep, it's just with Condor. The segfault shows up when running the
> test_quietly executable in eos/test during "installation" -- so it
> certainly works fine on non-Condor systems.
> >>
> >> cheers,
> >>
> >> Rich
> >>
> >>> On Oct 25, 2017, at 8:41 AM, Earl Bellinger <bellinger at mps.mpg.de>
> wrote:
> >>>
> >>> Dear Rich,
> >>>
> >>> Is the problem isolated to condor - i.e., have you tried running the
> >>> same inlist without condor?
> >>>
> >>> I haven't tried the new release yet but I've been running r10000 on a
> >>> condor machine without issue so far.
> >>>
> >>> Best regards,
> >>> Earl Bellinger
> >>>
> >>>
> >>> On Wed, Oct 25, 2017 at 3:22 PM, RICHARD H D TOWNSEND via Mesa-users
> >>> <mesa-users at lists.mesastar.org> wrote:
> >>>>
> >>>> Hi folks --
> >>>>
> >>>> I'm running into strange segmentation faults when running the latest
> MESA release on a Condor high-throughput system. Does anyone have any
> experience of MESA/Condor, and suggestions for getting things to work?
> >>>>
> >>>> Many thanks,
> >>>>
> >>>> Rich
> >>>>
> >>
> >>
> >>
> >>
> >> --
> >> Pablo Marchant Campos
> >> M.Sc on Astrophysics, Universidad Católica de Chile
> >> PhD on Astrophysics, Argelander-Institut für Astronomie, Universität
> Bonn
> >
>
>
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