[mesa-users] Question

Broxton Miles bjmiles at crimson.ua.edu
Wed Jun 24 12:45:37 EDT 2015 

>
> This is the output of the gfortan
> [lnovais at new-host home]$ gfortran -v
> Using built-in specs.
> COLLECT_GCC=gfortran
> COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/5.1.1/lto-wrapper
> Target: x86_64-redhat-linux
> Configured with: ../configure --enable-bootstrap
> --enable-languages=c,c++,objc,obj-c++,fortran,ada,go,lto --prefix=/usr
> --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=
> http://bugzilla.redhat.com/bugzilla --enable-shared
> --enable-threads=posix --enable-checking=release --enable-multilib
> --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions
> --enable-gnu-unique-object --enable-linker-build-id
> --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array
> --disable-libgcj --with-default-libstdcxx-abi=c++98 --with-isl
> --enable-libmpx --enable-gnu-indirect-function --with-tune=generic
> --with-arch_32=i686 --build=x86_64-redhat-linux
> Thread model: posix
> gcc version 5.1.1 20150612 (Red Hat 5.1.1-3) (GCC)
> I just restarted the instalation... and it gives me back the error....

You're not initializing the mesasdk correctly. If you have it initialized
correctly the output should be something like

> Using built-in specs.
>
> COLLECT_GCC=/ccs/home/bjmiles/mesasdk/bin/gfortran.exec
>
>
> COLLECT_LTO_WRAPPER=/autofs/nccs-svm1_home1/bjmiles/mesasdk/bin/../libexec/gcc/x86_64-pc-linux-gnu/4.9.3/lto-wrapper
>
> Target: x86_64-pc-linux-gnu
>
> Configured with: ./configure CC=gcc --build=x86_64-pc-linux-gnu
> --prefix=/root/mesasdk --with-gmp=/root/mesasdk --with-mpfr=/root/mesasdk
> --with-mpc=/root/mesasdk --enable-languages=c,c++,fortran
> --disable-multilib --disable-nls --disable-libsanitizer
>
> Thread model: posix
>
> gcc version 4.9.3 20141212 (prerelease) (GCC)
>

  And like Rich said you need the latest release version of MESA.

Broxton

On Wed, Jun 24, 2015 at 12:37 PM, Liliana Novais <linovais at gmail.com> wrote:

> This is the output of the gfortan
>
> [lnovais at new-host home]$ gfortran -v
> Using built-in specs.
> COLLECT_GCC=gfortran
> COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/5.1.1/lto-wrapper
> Target: x86_64-redhat-linux
> Configured with: ../configure --enable-bootstrap
> --enable-languages=c,c++,objc,obj-c++,fortran,ada,go,lto --prefix=/usr
> --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=
> http://bugzilla.redhat.com/bugzilla --enable-shared
> --enable-threads=posix --enable-checking=release --enable-multilib
> --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions
> --enable-gnu-unique-object --enable-linker-build-id
> --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array
> --disable-libgcj --with-default-libstdcxx-abi=c++98 --with-isl
> --enable-libmpx --enable-gnu-indirect-function --with-tune=generic
> --with-arch_32=i686 --build=x86_64-redhat-linux
> Thread model: posix
> gcc version 5.1.1 20150612 (Red Hat 5.1.1-3) (GCC)
>
> I just restarted the instalation... and it gives me back the error....
>
> 2015-06-24 17:33 GMT+01:00 Broxton Miles <bjmiles at crimson.ua.edu>:
>
>> Let's keep this on the mailing list so make sure you're hitting reply all.
>>
>>  I started again and know I got the following error:
>>> /home/lnovais/mesasdk/trunk/utils
>>> building utils package.
>>> gfortran -fno-range-check  -fopenmp  -I../public -I../private
>>> -I../../include -Wunused-value -Werror -W -fimplicit-none   -fbounds-check
>>> -O2 -g -c -ffree-form   ../public/utils_def.f
>>> gfortran -fno-range-check  -fopenmp  -I../public -I../private
>>> -I../../include -Wunused-value -Werror -W -fimplicit-none   -fbounds-check
>>> -O2 -g -c -ffree-form   ../private/utils_isnan_okay.f
>>> ../private/utils_isnan_okay.f:43.36:
>>>          is_real_inf = (2*x==x .and. x /= 0)
>>>                                     1
>>> Warning: Inequality comparison for REAL(4) at (1)
>>> ../private/utils_isnan_okay.f:43.24:
>>>          is_real_inf = (2*x==x .and. x /= 0)
>>>                         1
>>> Warning: Equality comparison for REAL(4) at (1)
>>> ../private/utils_isnan_okay.f:37.31:
>>>          is_inf = (2*x==x .and. x /= 0)
>>>                                1
>>> Warning: Inequality comparison for REAL(8) at (1)
>>> ../private/utils_isnan_okay.f:37.19:
>>>          is_inf = (2*x==x .and. x /= 0)
>>>                    1
>>> Warning: Equality comparison for REAL(8) at (1)
>>> makefile:42: recipe for target 'utils_isnan_okay.o' failed
>>> make: *** [utils_isnan_okay.o] Error 1
>>> /home/lnovais/mesasdk/trunk/utils/make
>>> FAILED
>>>
>>> /home/lnovais/mesasdk/trunk/utils
>>> ./build_and_test FAILED
>>
>>
>> I'm not entirely sure of what could be causing that. What is the output
>> of gfortran --version and echo $MESASDK_ROOT?
>>
>> Broxton
>>
>>
>>
>> On Wed, Jun 24, 2015 at 12:22 PM, Liliana Novais <linovais at gmail.com>
>> wrote:
>>
>>> I started again and know I got the following error:
>>>
>>> /home/lnovais/mesasdk/trunk/utils
>>> building utils package.
>>>
>>> gfortran -fno-range-check  -fopenmp  -I../public -I../private
>>> -I../../include -Wunused-value -Werror -W -fimplicit-none   -fbounds-check
>>> -O2 -g -c -ffree-form   ../public/utils_def.f
>>> gfortran -fno-range-check  -fopenmp  -I../public -I../private
>>> -I../../include -Wunused-value -Werror -W -fimplicit-none   -fbounds-check
>>> -O2 -g -c -ffree-form   ../private/utils_isnan_okay.f
>>> ../private/utils_isnan_okay.f:43.36:
>>>
>>>          is_real_inf = (2*x==x .and. x /= 0)
>>>                                     1
>>> Warning: Inequality comparison for REAL(4) at (1)
>>> ../private/utils_isnan_okay.f:43.24:
>>>
>>>          is_real_inf = (2*x==x .and. x /= 0)
>>>                         1
>>> Warning: Equality comparison for REAL(4) at (1)
>>> ../private/utils_isnan_okay.f:37.31:
>>>
>>>          is_inf = (2*x==x .and. x /= 0)
>>>                                1
>>> Warning: Inequality comparison for REAL(8) at (1)
>>> ../private/utils_isnan_okay.f:37.19:
>>>
>>>          is_inf = (2*x==x .and. x /= 0)
>>>                    1
>>> Warning: Equality comparison for REAL(8) at (1)
>>> makefile:42: recipe for target 'utils_isnan_okay.o' failed
>>> make: *** [utils_isnan_okay.o] Error 1
>>>
>>> /home/lnovais/mesasdk/trunk/utils/make
>>> FAILED
>>>
>>>
>>> /home/lnovais/mesasdk/trunk/utils
>>> ./build_and_test FAILED
>>>
>>>
>>> 2015-06-24 16:49 GMT+01:00 Liliana Novais <linovais at gmail.com>:
>>>
>>>> I went to that site and downloaded it then I started to install
>>>> following the steps I'm gointo to erase all and start again because I
>>>> must had made a mistake somewhere
>>>>
>>>>
>>>> 2015-06-24 16:43 GMT+01:00 Broxton Miles <bjmiles at crimson.ua.edu>:
>>>>
>>>>> Liliana,
>>>>>
>>>>> I just have to download it? or do I need to run it also?
>>>>>>
>>>>>> I followed the steps on this site:
>>>>>>
>>>>>> http://joaofariaresearch.weebly.com/1/post/2012/04/installing-mesa.html
>>>>>>
>>>>>
>>>>>
>>>>> Yeah, you have to download it and install it/initialize it.
>>>>>
>>>>> I would say follow the instructions on the sdk site that pertain to
>>>>> your particular system:
>>>>>
>>>>>
>>>>> http://www.astro.wisc.edu/~townsend/static.php?ref=mesasdk#toc-Downloads
>>>>>
>>>>> Try following those instructions and those of the official MESA page
>>>>> <http://mesa.sourceforge.net/prereqs.html> and then report back your
>>>>> results, and we'll go from there.
>>>>>
>>>>> Broxton
>>>>>
>>>>> On Wed, Jun 24, 2015 at 11:37 AM, Liliana Novais <linovais at gmail.com>
>>>>> wrote:
>>>>>
>>>>>> I just have to download it? or do I need to run it also?
>>>>>>
>>>>>> I followed the steps on this site:
>>>>>>
>>>>>> http://joaofariaresearch.weebly.com/1/post/2012/04/installing-mesa.html
>>>>>>
>>>>>> 2015-06-24 16:34 GMT+01:00 Broxton Miles <bjmiles at crimson.ua.edu>:
>>>>>>
>>>>>>> Have you downloaded and initialized the mesasdk?
>>>>>>>
>>>>>>> The reason I ask is:
>>>>>>>
>>>>>>>> make: gfortran: Command not found
>>>>>>>
>>>>>>>
>>>>>>> It can't find the compiler.
>>>>>>>
>>>>>>> Broxton
>>>>>>>
>>>>>>> On Wed, Jun 24, 2015 at 11:31 AM, Liliana Novais <linovais at gmail.com
>>>>>>> > wrote:
>>>>>>>
>>>>>>>> Hello,
>>>>>>>>
>>>>>>>> I just was able to set the core number and there is another error
>>>>>>>> on my installation:
>>>>>>>>
>>>>>>>> [lnovais at new-host MESA]$ ./install
>>>>>>>> checking if ndiff is installed ...
>>>>>>>> no! running install_ndiff
>>>>>>>> ndiff installed in utils/ndiff/
>>>>>>>>
>>>>>>>> /home/lnovais/Programs/MESA/const
>>>>>>>> building const package.
>>>>>>>>
>>>>>>>> gfortran -fno-range-check  -fopenmp  -I../public -I../private
>>>>>>>> -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
>>>>>>>> -ffixed-form -ffixed-line-length-132 ../public/const_def.f
>>>>>>>> make: gfortran: Command not found
>>>>>>>> makefile:26: recipe for target 'const_def.o' failed
>>>>>>>> make: *** [const_def.o] Error 127
>>>>>>>>
>>>>>>>> /home/lnovais/Programs/MESA/const/make
>>>>>>>> FAILED
>>>>>>>>
>>>>>>>>
>>>>>>>> /home/lnovais/Programs/MESA/const
>>>>>>>> ./build_and_test FAILED
>>>>>>>>
>>>>>>>>
>>>>>>>> What is still missing?
>>>>>>>>
>>>>>>>> Thanks
>>>>>>>> Liliana
>>>>>>>>
>>>>>>>>
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>>>>>>>> mesa-users mailing list
>>>>>>>> mesa-users at lists.sourceforge.net
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>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>
>>>
>>
>
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