[mesa-users] Install fail on Linux Mint 17
Jared Brooks
jcbrooks at physics.ucsb.edu
Tue Oct 14 20:26:20 EDT 2014
Yes this was fixed. I was missing some libraries that are now listed on the
mesa sdk site (http://www.astro.wisc.edu/~townsend/static.php?ref=mesasdk).
-Jared
On Tue, Oct 14, 2014 at 5:15 PM, Amber Lauer <alauer1 at tigers.lsu.edu> wrote:
> Did this get fixed? Sounds like you are missing libc-dev.
>
> On Fri, Aug 1, 2014 at 8:57 AM, Pablo Marchant <pamarca at gmail.com> wrote:
>
>> Just want to add that I'm using the latest MESA release with the latest
>> SDK on mint 17, and I don't have any issues. Don't think it would make any
>> difference but I have the SDK on my home folder.
>>
>> Cheers!
>>
>>
>> On Thu, Jul 31, 2014 at 11:12 PM, Jared Brooks <jcbrooks at physics.ucsb.edu
>> > wrote:
>>
>>> Hey Rich,
>>>
>>> Here is the output for that (btw, I know the sdk doesn't need to be in
>>> /opt anymore, but i put it there just in case):
>>>
>>> Driving: /opt/mesasdk/bin/gfortran.exec -ffpe-summary=none
>>> -I/usr/include/x86_64-linux-gnu -v -o hellow hellow.f90 -l gfortran -l m
>>> -shared-libgcc
>>> Using built-in specs.
>>> COLLECT_GCC=/opt/mesasdk/bin/gfortran.exec
>>>
>>> COLLECT_LTO_WRAPPER=/opt/mesasdk/bin/../libexec/gcc/x86_64-pc-linux-gnu/4.10.0/lto-wrapper
>>> Target: x86_64-pc-linux-gnu
>>> Configured with: ./configure CC=gcc --build=x86_64-pc-linux-gnu
>>> --prefix=/root/mesasdk --with-gmp=/root/mesasdk --with-mpfr=/root/mesasdk
>>> --with-mpc=/root/mesasdk --enable-languages=c,c++,fortran
>>> --disable-multilib --disable-nls --disable-libsanitizer
>>> Thread model: posix
>>> gcc version 4.10.0 20140710 (experimental) (GCC)
>>> COLLECT_GCC_OPTIONS='-ffpe-summary=none' '-I'
>>> '/usr/include/x86_64-linux-gnu' '-v' '-o' 'hellow' '-shared-libgcc'
>>> '-mtune=generic' '-march=x86-64'
>>> /opt/mesasdk/bin/../libexec/gcc/x86_64-pc-linux-gnu/4.10.0/f951
>>> hellow.f90 -I /usr/include/x86_64-linux-gnu -quiet -dumpbase hellow.f90
>>> -mtune=generic -march=x86-64 -auxbase hellow -version -ffpe-summary=none
>>> -fintrinsic-modules-path
>>> /opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/finclude -o
>>> /tmp/ccovoyju.s
>>> GNU Fortran (GCC) version 4.10.0 20140710 (experimental)
>>> (x86_64-pc-linux-gnu)
>>> compiled by GNU C version 4.10.0 20140710 (experimental), GMP
>>> version 5.1.3, MPFR version 3.1.2, MPC version 1.0.2
>>> GGC heuristics: --param ggc-min-expand=30 --param ggc-min-heapsize=4096
>>> GNU Fortran (GCC) version 4.10.0 20140710 (experimental)
>>> (x86_64-pc-linux-gnu)
>>> compiled by GNU C version 4.10.0 20140710 (experimental), GMP
>>> version 5.1.3, MPFR version 3.1.2, MPC version 1.0.2
>>> GGC heuristics: --param ggc-min-expand=30 --param ggc-min-heapsize=4096
>>> COLLECT_GCC_OPTIONS='-ffpe-summary=none' '-I'
>>> '/usr/include/x86_64-linux-gnu' '-v' '-o' 'hellow' '-shared-libgcc'
>>> '-mtune=generic' '-march=x86-64'
>>> as -v -I /usr/include/x86_64-linux-gnu --64 -o /tmp/ccWYrvfN.o
>>> /tmp/ccovoyju.s
>>> GNU assembler version 2.24 (x86_64-linux-gnu) using BFD version (GNU
>>> Binutils for Ubuntu) 2.24
>>> Reading specs from
>>> /opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/../../../../lib64/libgfortran.spec
>>> rename spec lib to liborig
>>> COLLECT_GCC_OPTIONS='-ffpe-summary=none' '-I'
>>> '/usr/include/x86_64-linux-gnu' '-v' '-o' 'hellow' '-shared-libgcc'
>>> '-mtune=generic' '-march=x86-64'
>>>
>>> COMPILER_PATH=/opt/mesasdk/bin/../libexec/gcc/x86_64-pc-linux-gnu/4.10.0/:/opt/mesasdk/bin/../libexec/gcc/
>>>
>>> LIBRARY_PATH=/opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/:/opt/mesasdk/bin/../lib/gcc/:/opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/x86_64-linux-gnu/:./:/opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/../../../:/lib/:/usr/lib/
>>> COLLECT_GCC_OPTIONS='-ffpe-summary=none' '-I'
>>> '/usr/include/x86_64-linux-gnu' '-v' '-o' 'hellow' '-shared-libgcc'
>>> '-mtune=generic' '-march=x86-64'
>>> /opt/mesasdk/bin/../libexec/gcc/x86_64-pc-linux-gnu/4.10.0/collect2
>>> --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o
>>> hellow crt1.o crti.o
>>> /opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/crtbegin.o
>>> -L/opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0
>>> -L/opt/mesasdk/bin/../lib/gcc
>>> -L/opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/../../../../lib64
>>> -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/x86_64-linux-gnu -L.
>>> -L/opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/../../..
>>> /tmp/ccWYrvfN.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc
>>> -lc -lgcc_s -lgcc
>>> /opt/mesasdk/bin/../lib/gcc/x86_64-pc-linux-gnu/4.10.0/crtend.o crtn.o
>>>
>>> /usr/bin/ld: cannot find crt1.o: No such file or directory
>>> /usr/bin/ld: cannot find crti.o: No such file or directory
>>> /usr/bin/ld: cannot find -lm
>>> /usr/bin/ld: cannot find -lm
>>> /usr/bin/ld: cannot find -lc
>>> /usr/bin/ld: cannot find crtn.o: No such file or directory
>>> collect2: error: ld returned 1 exit status
>>>
>>>
>>>
>>> Rob, those export commands didn't change anything.
>>>
>>> -Jared
>>>
>>>
>>> On Thu, Jul 31, 2014 at 2:02 PM, Richard Townsend <
>>> townsend at astro.wisc.edu> wrote:
>>>
>>>> Hi Jared —
>>>>
>>>> Try this: cut and paste the program below into hellow.f90, and then do
>>>>
>>>> gfortran -v -o hellow hellow.f90
>>>>
>>>> Can you send the output printed during compilation?
>>>>
>>>> cheers,
>>>>
>>>> Rich
>>>>
>>>> —CUT—
>>>> program hellow
>>>> print *,'hello world'
>>>> end program hellow
>>>> —CUT—
>>>>
>>>> On Jul 31, 2014, at 3:50 PM, Jared Brooks <jcbrooks at physics.ucsb.edu>
>>>> wrote:
>>>>
>>>> Hi Rob,
>>>>
>>>> Both those folders exist on my system.
>>>>
>>>> I have tried a few fresh checkouts, I tried some of the things
>>>> suggested in the thread a couple weeks ago, such as:
>>>> export LIBRARY_PATH=/usr/lib/x86_64-linux-gnu
>>>> export C_INCLUDE_PATH=/usr/include/x86_64-linux-gnu/
>>>>
>>>> These seemed to change results for the person who first tried these,
>>>> but I got the exact same error message every time.
>>>>
>>>> Here is the output for "gfortran --version"
>>>> GNU Fortran (GCC) 4.10.0 20140710 (experimental)
>>>>
>>>> -Jared
>>>>
>>>>
>>>> On Thu, Jul 31, 2014 at 1:33 PM, Robert FARMER <rjfarmer at asu.edu>
>>>> wrote:
>>>>
>>>>> Hmm, mints a derivative of ubunut/debain so the new wrapper script
>>>>> should of taken care of it.
>>>>>
>>>>> Do any of the following folders exist on your system?
>>>>> /usr/lib64
>>>>> /usr/lib/x86_64-linux-gnu
>>>>>
>>>>> And which steps specifically have you tried? and have you also tried a
>>>>> clean checkout? I know you said gfortran --version gives the correct
>>>>> output, but what is that just in case your terminal has the old sdk loaded
>>>>> by accident.
>>>>>
>>>>> Rob
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> On Thu, Jul 31, 2014 at 12:02 PM, Jared Brooks <
>>>>> jcbrooks at physics.ucsb.edu> wrote:
>>>>>
>>>>>> Hello mesa-users,
>>>>>>
>>>>>> I am trying to install version 6596 on Linux Mint 17. I installed the
>>>>>> most recent sdk, "gfortran --version" gives the correct output. I looked
>>>>>> through the archives for similar problems and tried some of their
>>>>>> solutions, but I get the same error every time:
>>>>>>
>>>>>> /home/jcbrooks/mesa_6596/const
>>>>>> building const package.
>>>>>>
>>>>>> make: `libconst.a' is up to date.
>>>>>> make: `libconst.a' is up to date.
>>>>>> gfortran -fopenmp -o ../tester test_const.o -L../../make -lconst
>>>>>>
>>>>>> /usr/bin/ld: cannot find crt1.o: No such file or directory
>>>>>> /usr/bin/ld: cannot find crti.o: No such file or directory
>>>>>> /usr/bin/ld: cannot find -lm
>>>>>> /usr/bin/ld: cannot find -lm
>>>>>> /usr/bin/ld: cannot find -lpthread
>>>>>> /usr/bin/ld: cannot find -lc
>>>>>> /usr/bin/ld: cannot find crtn.o: No such file or directory
>>>>>>
>>>>>> collect2: error: ld returned 1 exit status
>>>>>> make: *** [tester] Error 1
>>>>>>
>>>>>> /home/jcbrooks/mesa_6596/
>>>>>> const/test
>>>>>> FAILED
>>>>>>
>>>>>>
>>>>>> /home/jcbrooks/mesa_6596/const
>>>>>> ./build_and_test FAILED
>>>>>>
>>>>>>
>>>>>>
>>>>>> I don't have too much experience with Linux, so any help would be
>>>>>> greatly appreciated, thanks.
>>>>>>
>>>>>> -Jared
>>>>>>
>>>>>>
>>>>>> ------------------------------------------------------------------------------
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>>>>>>
>>>>>
>>>>>
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>>>>>
>>>>
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>>>>
>>>
>>>
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>>>
>>
>>
>> --
>> Pablo Marchant Campos
>> M.Sc on Astrophysics, Universidad Católica de Chile
>> PhD student, Argelander-Institut für Astronomie
>>
>>
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>
>
> --
> Amber Lauer. M.S. Physics
> PhD Student,
> Graduate School of Physics,
> Louisiana State University
>
>
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