[mesa-users] Problem in create_zams with ifort

[Anwesh Mazumdar]

Dear Francis,

Thanks for your help. You were spot on. I did indeed have libraries from an
older version of ifort lurking around, which had caused the problem. A
clean reinstall of ifort 14.0.1 fixed it. Thanks for the guidance.

Cheers,
Anwesh


On Sat, May 10, 2014 at 7:22 AM, Francis Timmes <fxt44 at mac.com> wrote:

> these are linking errors. possible reasons include mixing
> 13.x and 14.x libs (not enough info is given on what “ifort” may
> be defined as), not using the proper static or dynamic version of the lib,
> or just not including the necessary libs on the link line (i suspect this
> may be the case from casually looking). also, try googling the exact
> error message to see what others may have found.
>
> i don’t have time to dig into this myself as my ifort and gfortran
> versions are working fine, but do post your solution as others may
> find it useful.
>
> fxt
>
>
>
>
>
> On May 9, 2014, at 11:47 AM, Bill Paxton <paxton at kitp.ucsb.edu> wrote:
>
> > Hi Anwesh,
> >
> > Let's see if we can get help from mesa-users on this one.
> >
> > Cheers,
> > Bill
> >
> >
> >
> >
> > On May 9, 2014, at 11:45 AM, Anwesh Mazumdar wrote:
> >
> >> Sorry, forgot to mention that I am using version 6208.
> >>
> >> Anwesh
> >>
> > On May 9, 2014, at 11:43 AM, Anwesh Mazumdar wrote:
> >
> >> Dear Bill,
> >>
> >> Thanks for fixing the small bug.
> >>
> >> Now I have a problem with compilation of the star_create_zams. I am
> using ifort 14, which you had tested on my machine also. Perhaps I have
> screwed up the setup somewhere. Could you kindly guide me?
> >>
> >> I am appending the terminal output of the "./mk" command and attaching
> the inlist_zams_specification which is the only file I edited in this
> directory.
> >>
> >> With the standard given zams file, I can happily evolve a model. It is
> only with the zams model creation that I hit the problem.
> >>
> >> Cheers,
> >> Anwesh
> >>
> >>
> >>
> >> anwesh at procyon:/data/research/mesa/star/test_suite/create_zams$ ./clean
> >> anwesh at procyon:/data/research/mesa/star/test_suite/create_zams$ ./mk
> >> ifort  -assume protect-parens -fp-model source -prec-div -prec-sqrt
> -vec-report0 -traceback -error-limit 6 -openmp -threads -check uninit
> -check pointers -check bounds -check all -g -free -fpp -fpp
> -I../../../../include  -c ../src/run_star_extras.f
> >> ifort  -assume protect-parens -fp-model source -prec-div -prec-sqrt
> -vec-report0 -traceback -error-limit 6 -openmp -threads -check uninit
> -check pointers -check bounds -check all -g -free -fpp -fpp
> -I../../../../include  -c ../../../../star/job/run_star.f
> >> ifort  -assume protect-parens -fp-model source -prec-div -prec-sqrt
> -vec-report0 -traceback -error-limit 6 -openmp -threads -check uninit
> -check pointers -check bounds -check all -g -free -fpp -fpp
> -I../../../../include  -c ../src/run.f
> >> ifort -openmp -threads -o ../star_create_zams run_star_extras.o
> run_star.o  run.o -L../../../../lib -lstar -lionization -latm -lcolors
> -lmlt -lnse -lnet -leos -lkap -lrates -lneu -lchem -linterp_2d -linterp_1d
> -lnum -lf2crlibm -lcrlibm -lmtx -lconst -lutils -lmesaklu -lmesalapack
> -lmesablas
> >> ../../../../lib/libstar.a(run_star_support.o): In function
> `run_star_support_mp_do_load1_star_..0':
> >> ../job/run_star_support.f:(.text+0x7329): undefined reference to
> `_intel_fast_memmove'
> >> ../job/run_star_support.f:(.text+0x79ea): undefined reference to
> `_intel_fast_memmove'
> >> ../../../../lib/libstar.a(run_star_support.o): In function
> `run_star_support_mp_do_load1_star_':
> >> ../job/run_star_support.f:(.text+0x12aa9): undefined reference to
> `_intel_fast_memmove'
> >> ../job/run_star_support.f:(.text+0x1316a): undefined reference to
> `_intel_fast_memmove'
> >> ../../../../lib/libstar.a(alloc.o): In function
> `alloc_mp_set_chem_names_':
> >> ../private/alloc.f:(.text+0x13524): undefined reference to
> `_intel_fast_memmove'
> >> ../../../../lib/libstar.a(alloc.o):../private/alloc.f:(.text+0x1368c):
> more undefined references to `_intel_fast_memmove' follow
> >> ../../../../lib/libnet.a(net_initialize.o): In function
> `setup_net_info':
> >> /data/research/mesa/net/make/../private/net_initialize.f:179: undefined
> reference to `__intel_rtc_CheckStackVars'
> >> ../../../../lib/libnet.a(net_initialize.o): In function
> `alloc_net_general_info':
> >> /data/research/mesa/net/make/../private/net_initialize.f:263: undefined
> reference to `__intel_rtc_CheckStackVars'
> >> ../../../../lib/libnet.a(net_initialize.o): In function
> `set_reaction_max_z':
> >> /data/research/mesa/net/make/../private/net_initialize.f:285: undefined
> reference to `__intel_rtc_CheckStackVars'
> >> ../../../../lib/libnet.a(net_initialize.o): In function
> `net_initializeset_reaction_max_z_mp_update_max_z_':
> >> /data/research/mesa/net/make/../private/net_initialize.f:301: undefined
> reference to `__intel_rtc_CheckStackVars'
> >> ../../../../lib/libnet.a(net_initialize.o): In function
> `do_read_net_file':
> >> /data/research/mesa/net/make/../private/net_initialize.f:434: undefined
> reference to `__intel_rtc_CheckStackVars'
> >>
> ../../../../lib/libnet.a(net_initialize.o):/data/research/mesa/net/make/../private/net_initialize.f:1055:
> more undefined references to `__intel_rtc_CheckStackVars' follow
> >> ../../../../lib/librates.a(load_weak.o): In function
> `mod_load_weakprivate_load_weak_tables_mp_adjust_name_':
> >> ../private/load_weak.f:(.text+0xc3a0): undefined reference to
> `_intel_fast_memmove'
> >> ../../../../lib/librates.a(rates_initialize.o): In function
> `rates_initialize_mp_increase_num_reactions_':
> >> ../private/rates_initialize.f:(.text+0x2111): undefined reference to
> `_intel_fast_memmove'
> >> ../private/rates_initialize.f:(.text+0x2275): undefined reference to
> `_intel_fast_memmove'
> >> ../../../../lib/librates.a(rates_initialize.o): In function
> `rates_initialize_mp_alloc_reaction_ir_':
> >> ../private/rates_initialize.f:(.text+0xba64): undefined reference to
> `_intel_fast_memmove'
> >> ../private/rates_initialize.f:(.text+0xbbde): undefined reference to
> `_intel_fast_memmove'
> >>
> ../../../../lib/librates.a(rates_initialize.o):../private/rates_initialize.f:(.text+0xf16a):
> more undefined references to `_intel_fast_memmove' follow
> >> ../../../../lib/librates.a(rates_names.o): In function
> `rates_names_mp_set_reaction_names_':
> >> ../private/rates_names.f:(.text+0x91fe5): undefined reference to
> `__intel_rtc_CheckStackVars'
> >> ../../../../lib/libchem.a(nuclide_set_mod.o): In function
> `nuclide_set_mod_mp_read_nuclide_set_':
> >> ../private/nuclide_set_mod.f:(.text+0x1ec8): undefined reference to
> `_intel_fast_memmove'
> >> ../../../../lib/libnum.a(mod_newton.o): In function
> `mod_newtondo_newton_mp_setmatrix_':
> >> ../private/mod_newton.f:(.text+0xce91): undefined reference to
> `_intel_fast_memmove'
> >> make: *** [star_create_zams] Error 1
> >>
> >> FAILED
> >>
> >>
> >>
> >>
> >> --
> >> Dr. Anwesh Mazumdar
> >> Associate Professor
> >> Homi Bhabha Centre for Science Education
> >> Tata Institute of Fundamental Research
> >> V. N. Purav Marg, Mankhurd, Mumbai 400088, India.
> >> Phone: +91 22 2507 2424   Fax: +91 22 2556 6803
> >> E-mail: anwesh at tifr.res.in
> >>
> >> <inlist_zams_specification>
> >
> >
> ------------------------------------------------------------------------------
> > Is your legacy SCM system holding you back? Join Perforce May 7 to find
> out:
> > • 3 signs your SCM is hindering your productivity
> > • Requirements for releasing software faster
> > • Expert tips and advice for migrating your SCM now
> >
> http://p.sf.net/sfu/perforce_______________________________________________
> > mesa-users mailing list
> > mesa-users at lists.sourceforge.net
> > https://lists.sourceforge.net/lists/listinfo/mesa-users
>
>


-- 
Dr. Anwesh Mazumdar
Associate Professor
Homi Bhabha Centre for Science Education
Tata Institute of Fundamental Research
V. N. Purav Marg, Mankhurd, Mumbai 400088, India.
Phone: +91 22 2507 2424   Fax: +91 22 2556 6803
E-mail: anwesh at tifr.res.in
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.mesastar.org/pipermail/mesa-users/attachments/20140515/b51b7c41/attachment.html>