[mesa-users] mesa-users Digest, Vol 50, Issue 47
Vahid Borji
borji.vahid at gmail.com
Fri Oct 18 04:35:38 EDT 2013
On Fri, Oct 18, 2013 at 9:53 AM,
<mesa-users-request at lists.sourceforge.net>wrote:
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> Today's Topics:
>
> 1. Re: mesa problems with the newly added OP opacity tables for
> a05 and a09 -- the old OP gs98 tables are fine (Aaron Dotter)
> 2. Re: mesa problems with the newly added OP opacity tables for
> a05 and a09 -- the old OP gs98 tables are fine (Bill Paxton)
> 3. svn download error (Bill Wolf)
> 4. Re: svn download error (Bill Paxton)
> 5. Re: svn download error (Josiah Schwab)
> 6. Re: svn download error (Bill Wolf)
> 7. Re: svn download error (Francis Timmes)
> 8. Re: XCode 5 and the MESA SDK (Pam Rowden)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Fri, 18 Oct 2013 11:52:39 +1100
> From: Aaron Dotter <aaron.dotter at gmail.com>
> Subject: Re: [mesa-users] mesa problems with the newly added OP
> opacity tables for a05 and a09 -- the old OP gs98 tables are fine
> To: MESA users group group <mesa-users at lists.sourceforge.net>
> Message-ID:
> <
> CAN5--jO0AJuWig9G316WiQnWM8TgeC7HuWVu4wW5X-qaJZdjJQ at mail.gmail.com>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Hi,
>
> A disappointing ending to this discussion:
>
> After some time and effort it seems that the OP server is producing tables
> with NaNs in them. The solution is to not support new OP tables (from
> their web server, in the OPAL type1 format) until and unless OP fixes the
> problem.
>
> Aaron
> -------------- next part --------------
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>
> ------------------------------
>
> Message: 2
> Date: Thu, 17 Oct 2013 18:14:58 -0700
> From: Bill Paxton <paxton at kitp.ucsb.edu>
> Subject: Re: [mesa-users] mesa problems with the newly added OP
> opacity tables for a05 and a09 -- the old OP gs98 tables are fine
> To: MESA users group group <mesa-users at lists.sourceforge.net>
> Message-ID: <E0A3E72D-5D06-44F9-A6DC-FDF74ED6190B at kitp.ucsb.edu>
> Content-Type: text/plain; charset=us-ascii
>
>
> On Oct 17, 2013, at 5:52 PM, Aaron Dotter wrote:
>
> > After some time and effort it seems that the OP server is producing
> tables with NaNs in them. The solution is to not support new OP tables
> (from their web server, in the OPAL type1 format) until and unless OP fixes
> the problem.
>
>
> Hi,
>
> Thanks to Aaron for finding the source of this problem. And my apologies
> for saying it was a problem with the OPAL software!
>
> Keep in mind that this is only a problem with the new OP data files ---
> the existing mesa OP_gs98 files are fine since they are built using older
> data from OP that isn't polluted by NaNs.
>
> To fill in a few more details in case you are interested, I only find 6
> NaNs per new OP input file and (I think) they are only at the extreme low
> density edge of the tables. Out of curiosity, I just did a global replace
> of the NaNs by -1's and reran the preprocessor. It seemed to do okay. If
> you are so rash that you'd want to use these hacked OP opacities as a
> temporary solution until we get repaired OP input data, please let me know.
>
> -Bill
>
>
>
>
>
>
>
>
> ------------------------------
>
> Message: 3
> Date: Thu, 17 Oct 2013 19:26:52 -0700
> From: Bill Wolf <wmwolf at physics.ucsb.edu>
> Subject: [mesa-users] svn download error
> To: "mesa-users at lists.sourceforge.net group"
> <mesa-users at lists.sourceforge.net>
> Cc: Lia Medeiros <lia.cf.medeiros at gmail.com>
> Message-ID: <B0356915-9096-45C4-8D1C-D786D75644B6 at physics.ucsb.edu>
> Content-Type: text/plain; charset=us-ascii
>
> Hi all,
>
> I'm trying to help a student install MESA and we're running into an svn
> error I've not seen before. First off, we're using a Macbook Pro with Mac
> OS X 10.8.5. Xcode 5 and the command line tools are installed (we tried
> this before on OS X 10.6.8 and had the same problem, though).
>
> When attempting to execute the line:
>
> svn co -r 5527 svn://svn.code.sf.net/p/mesa/code/trunk mesa
>
> in the home directory, we get the following error
>
> svn: E00061: Can't connect to host 'svn.code.sf.net': Connection refused
>
>
> Some background: the svn download was attempted earlier and started off
> fine, but then the internet connection unexpectedly terminated. After some
> failed attempts at restarting that checkout that resulted in a system
> freeze, the first mesa directory was deleted and a fresh checkout was
> attempted, but this error has occurred every time. Any thoughts on what
> might be causing this refusal of service?
>
> Thanks for your help!
>
> Regards,
>
> Bill
>
>
> ________________________
> William Wolf
> wmwolf at physics.ucsb.edu
>
> UCSB Department of Physics
>
>
>
>
> ------------------------------
>
> Message: 4
> Date: Thu, 17 Oct 2013 19:48:07 -0700
> From: Bill Paxton <paxton at kitp.ucsb.edu>
> Subject: Re: [mesa-users] svn download error
> To: Bill Wolf <wmwolf at physics.ucsb.edu>
> Cc: "mesa-users at lists.sourceforge.net group"
> <mesa-users at lists.sourceforge.net>, Lia Medeiros
> <lia.cf.medeiros at gmail.com>
> Message-ID: <292DAF5C-72E7-4C46-84E8-2C9A5B3E77FD at kitp.ucsb.edu>
> Content-Type: text/plain; charset=us-ascii
>
> Hi,
>
> I've occasionally had problems with sourceforge refusing a connection.
> Sometimes I'd give it a few minutes and then it would work. You might
> try any magical incantations you've learned in your graduate physics
> classes. "By the ghost of Gauss and the eyelashes of Einstein, I command
> you computer to work properly this time." It might help.
>
> Good luck,
> Bill
>
>
> On Oct 17, 2013, at 7:26 PM, Bill Wolf wrote:
>
> > Hi all,
> >
> > I'm trying to help a student install MESA and we're running into an svn
> error I've not seen before. First off, we're using a Macbook Pro with Mac
> OS X 10.8.5. Xcode 5 and the command line tools are installed (we tried
> this before on OS X 10.6.8 and had the same problem, though).
> >
> > When attempting to execute the line:
> >
> > svn co -r 5527 svn://svn.code.sf.net/p/mesa/code/trunk mesa
> >
> > in the home directory, we get the following error
> >
> > svn: E00061: Can't connect to host 'svn.code.sf.net': Connection refused
> >
> >
> > Some background: the svn download was attempted earlier and started off
> fine, but then the internet connection unexpectedly terminated. After some
> failed attempts at restarting that checkout that resulted in a system
> freeze, the first mesa directory was deleted and a fresh checkout was
> attempted, but this error has occurred every time. Any thoughts on what
> might be causing this refusal of service?
> >
> > Thanks for your help!
> >
> > Regards,
> >
> > Bill
> >
> >
> > ________________________
> > William Wolf
> > wmwolf at physics.ucsb.edu
> >
> > UCSB Department of Physics
> >
> >
> >
> ------------------------------------------------------------------------------
> > October Webinars: Code for Performance
> > Free Intel webinars can help you accelerate application performance.
> > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most
> from
> > the latest Intel processors and coprocessors. See abstracts and register
> >
> >
> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
> > _______________________________________________
> > mesa-users mailing list
> > mesa-users at lists.sourceforge.net
> > https://lists.sourceforge.net/lists/listinfo/mesa-users
>
>
>
>
> ------------------------------
>
> Message: 5
> Date: Thu, 17 Oct 2013 20:08:35 -0700
> From: Josiah Schwab <jwschwab at berkeley.edu>
> Subject: Re: [mesa-users] svn download error
> To: "Bill Wolf" <wmwolf at physics.ucsb.edu>
> Cc: "mesa-users at lists.sourceforge.net group"
> <mesa-users at lists.sourceforge.net>, Lia Medeiros
> <lia.cf.medeiros at gmail.com>
> Message-ID: <87d2n36zt8.fsf at berkeley.edu>
> Content-Type: text/plain
>
> Hi Bill,
>
> > Some background: the svn download was attempted earlier and started
> > off fine, but then the internet connection unexpectedly
> > terminated. After some failed attempts at restarting that checkout
> > that resulted in a system freeze, the first mesa directory was deleted
> > and a fresh checkout was attempted, but this error has occurred every
> > time. Any thoughts on what might be causing this refusal of service?
>
> Can you reproduce the error with a different machine on the same
> network? Testing that would narrow things down.
>
> Josiah
>
>
>
> ------------------------------
>
> Message: 6
> Date: Thu, 17 Oct 2013 20:17:20 -0700
> From: Bill Wolf <wmwolf at physics.ucsb.edu>
> Subject: Re: [mesa-users] svn download error
> To: Josiah Schwab <jwschwab at berkeley.edu>
> Cc: "mesa-users at lists.sourceforge.net group"
> <mesa-users at lists.sourceforge.net>, Lia Medeiros
> <lia.cf.medeiros at gmail.com>
> Message-ID: <2A2B99AF-3A48-40B1-B942-E41A080C6E92 at physics.ucsb.edu>
> Content-Type: text/plain; charset=us-ascii
>
> It failed on multiple networks, but when the machine was on on the same
> network as mine, I was still able to do a checkout on my machine, so I'm
> pretty certain the problem is localized to that one machine. Perhaps
> sourceforge blacklisted it when the first attempt went south?
>
> Bill
> ______________________________
> William Wolf
> Department of Physics
> University of California Santa Barbara
>
> > On Oct 17, 2013, at 8:08 PM, Josiah Schwab <jwschwab at berkeley.edu>
> wrote:
> >
> > Hi Bill,
> >
> >> Some background: the svn download was attempted earlier and started
> >> off fine, but then the internet connection unexpectedly
> >> terminated. After some failed attempts at restarting that checkout
> >> that resulted in a system freeze, the first mesa directory was deleted
> >> and a fresh checkout was attempted, but this error has occurred every
> >> time. Any thoughts on what might be causing this refusal of service?
> >
> > Can you reproduce the error with a different machine on the same
> > network? Testing that would narrow things down.
> >
> > Josiah
>
>
>
> ------------------------------
>
> Message: 7
> Date: Thu, 17 Oct 2013 20:28:59 -0700
> From: Francis Timmes <fxt44 at mac.com>
> Subject: Re: [mesa-users] svn download error
> To: Bill Wolf <wmwolf at physics.ucsb.edu>
> Cc: "mesa-users at lists.sourceforge.net group"
> <mesa-users at lists.sourceforge.net>, Lia Medeiros
> <lia.cf.medeiros at gmail.com>
> Message-ID: <DDA15CF4-84F7-45BA-8885-F775E65F8BBA at mac.com>
> Content-Type: text/plain; charset=us-ascii
>
> % cd $HOME
> % ls .??*
>
> remove any existing .svn files or folders that may be locking it up.
>
> fxt
>
>
>
> On Oct 17, 2013, at 8:17 PM, Bill Wolf <wmwolf at physics.ucsb.edu> wrote:
>
> > It failed on multiple networks, but when the machine was on on the same
> network as mine, I was still able to do a checkout on my machine, so I'm
> pretty certain the problem is localized to that one machine. Perhaps
> sourceforge blacklisted it when the first attempt went south?
> >
> > Bill
> > ______________________________
> > William Wolf
> > Department of Physics
> > University of California Santa Barbara
> >
> >> On Oct 17, 2013, at 8:08 PM, Josiah Schwab <jwschwab at berkeley.edu>
> wrote:
> >>
> >> Hi Bill,
> >>
> >>> Some background: the svn download was attempted earlier and started
> >>> off fine, but then the internet connection unexpectedly
> >>> terminated. After some failed attempts at restarting that checkout
> >>> that resulted in a system freeze, the first mesa directory was deleted
> >>> and a fresh checkout was attempted, but this error has occurred every
> >>> time. Any thoughts on what might be causing this refusal of service?
> >>
> >> Can you reproduce the error with a different machine on the same
> >> network? Testing that would narrow things down.
> >>
> >> Josiah
> >
> >
> ------------------------------------------------------------------------------
> > October Webinars: Code for Performance
> > Free Intel webinars can help you accelerate application performance.
> > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most
> from
> > the latest Intel processors and coprocessors. See abstracts and register
> >
> >
> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
> > _______________________________________________
> > mesa-users mailing list
> > mesa-users at lists.sourceforge.net
> > https://lists.sourceforge.net/lists/listinfo/mesa-users
>
>
>
>
> ------------------------------
>
> Message: 8
> Date: Fri, 18 Oct 2013 07:23:03 +0100
> From: Pam Rowden <pam.rowden27 at gmail.com>
> Subject: Re: [mesa-users] XCode 5 and the MESA SDK
> To: Richard Townsend <townsend at astro.wisc.edu>
> Cc: "mesa-users at lists.sourceforge.net"
> <mesa-users at lists.sourceforge.net>
> Message-ID:
> <CAOTqpxbEOs0vcHEVs-TjU=
> T0OBRg0M+D7nvSh_mGbsS4YY40sQ at mail.gmail.com>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Dear Jonathan and Rich
>
> Thank you for your replies and for taking the time to respond: it is
> appreciated.
>
> Pam
>
>
> On Thu, Oct 17, 2013 at 2:25 PM, Richard Townsend
> <townsend at astro.wisc.edu>wrote:
>
> > It's worth noting, however, that the SDK nevertheless requires the
> > command-line tools from XCode to be installed --- this is because the SDK
> > uses the XCode assembler, linker and supporting tools (e.g., 'make').
> >
> > cheers,
> >
> > Rich
> >
> > On Oct 17, 2013, at 3:17 PM, Jonathan Stott SJ <jstottsj at gmail.com>
> wrote:
> >
> > > Hi Pam,
> > >
> > > I don't know if you've used XCode before or not, but Fortran is not an
> > Apple-supported language and none of the Apple compilers come with OpenMP
> > enabled. The MESA SDK is compatible in the sense that the two don't
> > interfere with each other, but you can't[*] build Fortran source code
> from
> > within XCode, which makes it largely irrelevant from the point of view of
> > MESA.
> > >
> > > Jonathan
> > >
> > > *Allegedly it's possible to build Fortran source by configuring XCode
> to
> > use gfortran as an external compiler and binding it to the Fortran source
> > type, but I've never been able to get it to work, and looking online I
> > don't know that anyone else has either. The only solution I've found is
> to
> > build my Fortran into a library outside of XCode and then link the C/ObjC
> > code against my private library.
> > >
> > > On Oct 17, 2013, at 2:13 AM, Pam Rowden <pam.rowden27 at gmail.com>
> wrote:
> > >
> > >> Dear Mesa-Users
> > >>
> > >> My new iMac will be coming in the next couple of weeks equipped with
> > what I presume is the latest version of Mountain Lion: I also see that
> > Apple released XCode 5 on 13 September and that the development version
> of
> > the MESA SDK has the same date.
> > >>
> > >> Is the development version of the MESA SDK compatible with XCode 5, or
> > should I be looking at an earlier version of XCode and the current
> version
> > of the MESA SDK dated 8 April 2013?
> > >>
> > >> I look forward to hearing from you
> > >>
> > >> Pam
> > >>
> >
> ------------------------------------------------------------------------------
> > >> October Webinars: Code for Performance
> > >> Free Intel webinars can help you accelerate application performance.
> > >> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the
> > most from
> > >> the latest Intel processors and coprocessors. See abstracts and
> > register >
> > >>
> >
> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk_______________________________________________
> > >> mesa-users mailing list
> > >> mesa-users at lists.sourceforge.net
> > >> https://lists.sourceforge.net/lists/listinfo/mesa-users
> > >
> > >
> > >
> >
> ------------------------------------------------------------------------------
> > > October Webinars: Code for Performance
> > > Free Intel webinars can help you accelerate application performance.
> > > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the
> most
> > from
> > > the latest Intel processors and coprocessors. See abstracts and
> register
> > >
> > >
> >
> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
> > > _______________________________________________
> > > mesa-users mailing list
> > > mesa-users at lists.sourceforge.net
> > > https://lists.sourceforge.net/lists/listinfo/mesa-users
> >
> >
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> An HTML attachment was scrubbed...
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> ------------------------------
>
>
> ------------------------------------------------------------------------------
> October Webinars: Code for Performance
> Free Intel webinars can help you accelerate application performance.
> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most
> from
> the latest Intel processors and coprocessors. See abstracts and register >
> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
>
> ------------------------------
>
> _______________________________________________
> mesa-users mailing list
> mesa-users at lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/mesa-users
>
>
> End of mesa-users Digest, Vol 50, Issue 47
> ******************************************
>
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