[mesa-users] Test Failure on Supercomputer

Aaron Dotter aaron.dotter at gmail.com
Tue Jun 4 20:22:58 EDT 2013


Hi Jared,

Is it possible you installed the 32-bit version of the SDK rather than the
64-bit version?

We saw some issues with allocating tables a few months ago, but this was
specifically related to 32-bit OS (and therefore SDK).  It is possible to
run 32-bit programs on 64-bit machines, but then you may run into such
issues unnecessarily.

That problem ought not to occur in a 64-bit OS with a 64-bit compiler
unless the supercomputer has some strict settings on resources available to
a process (check with 'ulimit -a').

Aaron


On Wed, Jun 5, 2013 at 10:15 AM, Richard Townsend
<townsend at astro.wisc.edu>wrote:

> That's a pretty old SDK. If nobody suggest a better option, you could
> always try upgrading it.
>
> On Jun 4, 2013, at 7:11 PM, Jared Brooks wrote:
>
> > I'm trying to install mesa (4942) on a Linux based supercomputer using
> the mesa sdk.  The installation runs fine until it hits the star test cases
> and fails.
> >
> > This is the screen output:
> >
> > first file is short
> >
> > /home/jbrooks/mesa_4942/star/test
> > TEST FAILED -- compare test_output to tmp.txt
> >
> >
> > /home/jbrooks/mesa_4942/star
> > ./build_and_test FAILED
> >
> > I went into star/test and looked in log to find this:
> >
> >  saved initial &star_job inlist values: star_job_namelist.out
> >                                          version_number        4942
> >  Load1_eosDT_Table ierr        5014           1           3
> 0.0000000000000000        4.0000000000000001E-002
> >  Load1_eosDT_Table ierr        5014           2           1
>  0.20000000000000001        0.0000000000000000
> >  Load1_eosDT_Table ierr        5014           2           1
>  0.20000000000000001        0.0000000000000000
> >  Load1_eosDT_Table ierr        5014           1           1
> 0.0000000000000000        0.0000000000000000
> >  Load1_eosDT_Table ierr        5010           1           1
> 0.0000000000000000        0.0000000000000000
> >  Load1_eosDT_Table ierr        5010           1           1
> 0.0000000000000000        0.0000000000000000
> >  Load1_eosDT_Table ierr        5010           1           1
> 0.0000000000000000        0.0000000000000000
> >  Load1_eosDT_Table ierr        5010           1           1
> 0.0000000000000000        0.0000000000000000
> >  finish_load_model: failed in set_vars
> >  failed in finish_load_model
> >  star_load_zams ierr          -1
> > WARNING: allocate failed for eos tables
> >  do_load1_star ierr          -1
> > WARNING: allocate failed for eos tables
> >
> > Here is my mesa sdk troubleshooting info:
> >
> > [jbrooks at tscc-login1 mesa_4942]$ uname -a
> > Linux tscc-login1.sdsc.edu 2.6.32-279.22.1.el6.x86_64 #1 SMP Tue May 14
> 17:25:16 PDT 2013 x86_64 x86_64 x86_64 GNU/Linux
> > [jbrooks at tscc-login1 mesa_4942]$ gfortran --version
> > GNU Fortran (GCC) 4.7.2
> > Copyright (C) 2012 Free Software Foundation, Inc.
> >
> > GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
> > You may redistribute copies of GNU Fortran
> > under the terms of the GNU General Public License.
> > For more information about these matters, see the file named COPYING
> >
> > [jbrooks at tscc-login1 mesa_4942]$ echo $MESASDK_ROOT
> > /home/jbrooks/mesasdk
> > [jbrooks at tscc-login1 mesa_4942]$ echo $PATH
> >
> /home/jbrooks/mesasdk/bin:/projects/itp-group/mesasdk/bin/:/opt/openmpi/intel/ib/bin:/opt/intel/composer_xe_2013.1.117/bin/intel64:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/gold/bin:/opt/gold/sbin::/usr/java/latest/bin:/opt/maui/bin:/opt/torque/bin:/opt/torque/sbin:/opt/torque/bin:opt/torque/sbin:/opt/pdsh/bin:/opt/rocks/bin:/opt/rocks/sbin:/home/jbrooks/bin
> >
> >
> > Any help would appreciated.
> >
> > Thanks,
> >
> > Jared
> >
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