[mesa-users] Installing MESA
Jared Brooks
brooksjaredc at gmail.com
Wed Apr 11 18:08:41 EDT 2012
jared at ubuntu:~/mesa$ ./install
checking if ndiff is installed ...
yes!
/home/jared/mesa/const
building const package.
gfortran -fno-range-check -fopenmp -I../public -I../private
-I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c
-ffixed-form -ffixed-line-length-132 ../public/const_def.f
make: gfortran: Command not found
make: *** [const_def.o] Error 127
/home/jared/mesa/const/make
FAILED
/home/jared/mesa/const
./build_and_test FAILED
jared at ubuntu:~/mesa$ which gfortran
jared at ubuntu:~/mesa$ echo $MESASDK_ROOT
/opt/mesasdk
jared at ubuntu:~/mesa$ echo $PATH
/usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
On Wed, Apr 11, 2012 at 3:02 PM, Richard Townsend
<townsend at astro.wisc.edu>wrote:
> OK, the script isn't supposed to produce any output. So, progress is being
> made.
>
> When you say 'the same result', do you mean the 'gfortran: Command not
> found error'? If so, please repeat these steps after you get the error:
>
> which gfortran
>
> echo $MESASDK_ROOT
>
> echo $PATH
>
> cheers,
>
> Rich
>
> On Apr 11, 2012, at 4:57 PM, Jared Brooks wrote:
>
> I can execute 'more mesasdk_init.sh', and I can even run the script now,
> but it gives no output. Running ./install in /mesa still gives the same
> result.
>
> -Jared
>
> On Wed, Apr 11, 2012 at 2:52 PM, Richard Townsend <townsend at astro.wisc.edu
> > wrote:
>
>> OK, thanks. Are you still unable to execute 'more mesasdk_init.sh'?
>>
>> On Apr 11, 2012, at 4:50 PM, Jared Brooks wrote:
>>
>> jared at ubuntu:/opt/mesasdk/bin$ ls -l /opt/mesasdk/bin
>> total 24536
>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 c++
>> -rwxr-xr-x 1 500 500 2150346 2012-01-20 09:54 cpp
>> -rwxr-xr-x 1 500 500 77266 2012-01-20 10:03 fpx3
>> -rwxr-xr-x 1 500 500 2564 2012-01-20 10:03 fpx3_deps
>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 g++
>> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54 gcc
>> -rwxr-xr-x 2 500 500 119881 2012-01-20 09:54 gcc-ar
>> -rwxr-xr-x 2 500 500 119817 2012-01-20 09:54 gcc-nm
>> -rwxr-xr-x 2 500 500 119837 2012-01-20 09:54 gcc-ranlib
>> -rwxr-xr-x 1 500 500 1086658 2012-01-20 09:54 gcov
>> -rwxr-xr-x 2 500 500 2160578 2012-01-20 09:54 gfortran
>> -rwxr-xr-x 1 500 500 41082 2012-01-20 10:02 gif2h5
>> -rwxr-xr-x 1 500 500 38244 2012-01-20 10:02 h52gif
>> -rwxr-xr-x 1 500 500 12551 2012-01-20 10:02 h5cc
>> -rwxr-xr-x 1 500 500 112948 2012-01-20 10:02 h5copy
>> -rwxr-xr-x 1 500 500 19590 2012-01-20 10:02 h5debug
>> -rwxr-xr-x 1 500 500 229329 2012-01-20 10:02 h5diff
>> -rwxr-xr-x 1 500 500 197313 2012-01-20 10:02 h5dump
>> -rwxr-xr-x 1 500 500 11693 2012-01-20 10:02 h5fc
>> -rwxr-xr-x 1 500 500 79908 2012-01-20 10:02 h5import
>> -rwxr-xr-x 1 500 500 35368 2012-01-20 10:02 h5jam
>> -rwxr-xr-x 1 500 500 141757 2012-01-20 10:02 h5ls
>> -rwxr-xr-x 1 500 500 111278 2012-01-20 10:02 h5mkgrp
>> -rwxr-xr-x 1 500 500 69706 2012-01-20 10:02 h5perf_serial
>> -rwxr-xr-x 1 500 500 4434 2012-01-20 10:02 h5redeploy
>> -rwxr-xr-x 1 500 500 169697 2012-01-20 10:02 h5repack
>> -rwxr-xr-x 1 500 500 15639 2012-01-20 10:02 h5repart
>> -rwxr-xr-x 1 500 500 122193 2012-01-20 10:02 h5stat
>> -rwxr-xr-x 1 500 500 32235 2012-01-20 10:02 h5unjam
>> -rwxr-xr-x 1 500 500 1137 2012-01-20 10:03 mesasdk_arch_check.pl
>> -rwxr-xr-x 1 500 500 71 2012-01-20 09:55 mesasdk_blas_link
>> -rwxr-xr-x 1 500 500 89 2012-01-20 10:03 mesasdk_hdf5_link
>> -rwxr-xr-x 1 500 500 835 2012-01-20 10:03 mesasdk_init.csh
>> -rwxr-xr-x 1 500 500 611 2012-01-20 10:03 mesasdk_init.sh
>> -rwxr-xr-x 1 500 500 101 2012-01-20 09:58 mesasdk_lapack95_link
>> -rwxr-xr-x 1 500 500 95 2012-01-20 09:56 mesasdk_lapack_link
>> -rwxr-xr-x 1 500 500 83 2012-01-20 09:58 mesasdk_pgplot_link
>> -rwxr-xr-x 1 500 500 86 2012-01-20 10:03 mesasdk_se_link
>> -rwxr-xr-x 2 500 500 42426 2012-01-20 10:03 ndiff
>> -rwxr-xr-x 2 500 500 42426 2012-01-20 10:03 ndiff-2.00
>> -rwxr-xr-x 1 500 500 12512 2012-01-20 10:03 touchse
>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 x86_64-pc-linux-gnu-c++
>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 x86_64-pc-linux-gnu-g++
>> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc
>> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54
>> x86_64-pc-linux-gnu-gcc-4.7.0
>> -rwxr-xr-x 2 500 500 119881 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-ar
>> -rwxr-xr-x 2 500 500 119817 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-nm
>> -rwxr-xr-x 2 500 500 119837 2012-01-20 09:54
>> x86_64-pc-linux-gnu-gcc-ranlib
>> -rwxr-xr-x 2 500 500 2160578 2012-01-20 09:54 x86_64-pc-linux-gnu-gfortran
>>
>>
>> Here's the file I unpacked into /opt: mesasdk-x86_64-linux-20120120.tar.gz
>>
>>
>> On Wed, Apr 11, 2012 at 2:48 PM, Richard Townsend <
>> townsend at astro.wisc.edu> wrote:
>>
>>> Please could you send the new 'ls -l', and also let me know the actual
>>> name of the file you unpacked into /opt.
>>>
>>> cheers,
>>>
>>> Rich
>>>
>>> On Apr 11, 2012, at 4:46 PM, Jared Brooks wrote:
>>>
>>> I changed those permissions, and those changes were reflected by a ls
>>> -l, but it is still denying me permission.
>>>
>>> I downloaded the Linux 64 bit SDK from this page:
>>> http://www.astro.wisc.edu/~townsend/static.php?ref=mesasdk
>>>
>>> -Jared
>>>
>>> On Wed, Apr 11, 2012 at 2:37 PM, Richard Townsend <
>>> townsend at astro.wisc.edu> wrote:
>>>
>>>> As root user, execute the following:
>>>>
>>>> chmod 755 /opt/mesasdk/bin/mesasdk_init.csh
>>>> chmod 755 /opt/mesasdk/bin/mesasdk_init.sh
>>>>
>>>> I'm not sure what led to this problem; what version of the SDK are you
>>>> using (i.e., what file did you download)?
>>>>
>>>> cheers,
>>>>
>>>> Rich
>>>>
>>>> On Apr 11, 2012, at 4:34 PM, Jared Brooks wrote:
>>>>
>>>> jared at ubuntu:/opt/mesasdk/bin$ ls -l /opt/mesasdk/bin
>>>> total 24536
>>>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 c++
>>>> -rwxr-xr-x 1 500 500 2150346 2012-01-20 09:54 cpp
>>>> -rwxr-xr-x 1 500 500 77266 2012-01-20 10:03 fpx3
>>>> -rwxr-xr-x 1 500 500 2564 2012-01-20 10:03 fpx3_deps
>>>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 g++
>>>> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54 gcc
>>>> -rwxr-xr-x 2 500 500 119881 2012-01-20 09:54 gcc-ar
>>>> -rwxr-xr-x 2 500 500 119817 2012-01-20 09:54 gcc-nm
>>>> -rwxr-xr-x 2 500 500 119837 2012-01-20 09:54 gcc-ranlib
>>>> -rwxr-xr-x 1 500 500 1086658 2012-01-20 09:54 gcov
>>>> -rwxr-xr-x 2 500 500 2160578 2012-01-20 09:54 gfortran
>>>> -rwxr-xr-x 1 500 500 41082 2012-01-20 10:02 gif2h5
>>>> -rwxr-xr-x 1 500 500 38244 2012-01-20 10:02 h52gif
>>>> -rwxr-xr-x 1 500 500 12551 2012-01-20 10:02 h5cc
>>>> -rwxr-xr-x 1 500 500 112948 2012-01-20 10:02 h5copy
>>>> -rwxr-xr-x 1 500 500 19590 2012-01-20 10:02 h5debug
>>>> -rwxr-xr-x 1 500 500 229329 2012-01-20 10:02 h5diff
>>>> -rwxr-xr-x 1 500 500 197313 2012-01-20 10:02 h5dump
>>>> -rwxr-xr-x 1 500 500 11693 2012-01-20 10:02 h5fc
>>>> -rwxr-xr-x 1 500 500 79908 2012-01-20 10:02 h5import
>>>> -rwxr-xr-x 1 500 500 35368 2012-01-20 10:02 h5jam
>>>> -rwxr-xr-x 1 500 500 141757 2012-01-20 10:02 h5ls
>>>> -rwxr-xr-x 1 500 500 111278 2012-01-20 10:02 h5mkgrp
>>>> -rwxr-xr-x 1 500 500 69706 2012-01-20 10:02 h5perf_serial
>>>> -rwxr-xr-x 1 500 500 4434 2012-01-20 10:02 h5redeploy
>>>> -rwxr-xr-x 1 500 500 169697 2012-01-20 10:02 h5repack
>>>> -rwxr-xr-x 1 500 500 15639 2012-01-20 10:02 h5repart
>>>> -rwxr-xr-x 1 500 500 122193 2012-01-20 10:02 h5stat
>>>> -rwxr-xr-x 1 500 500 32235 2012-01-20 10:02 h5unjam
>>>> -rwxr-xr-x 1 500 500 1137 2012-01-20 10:03 mesasdk_arch_check.pl
>>>> -rwxr-xr-x 1 500 500 71 2012-01-20 09:55 mesasdk_blas_link
>>>> -rwxr-xr-x 1 500 500 89 2012-01-20 10:03 mesasdk_hdf5_link
>>>> -rwxrwx--- 1 500 500 835 2012-01-20 10:03 mesasdk_init.csh
>>>> -rwxrwx--- 1 500 500 611 2012-01-20 10:03 mesasdk_init.sh
>>>> -rwxr-xr-x 1 500 500 101 2012-01-20 09:58 mesasdk_lapack95_link
>>>> -rwxr-xr-x 1 500 500 95 2012-01-20 09:56 mesasdk_lapack_link
>>>> -rwxr-xr-x 1 500 500 83 2012-01-20 09:58 mesasdk_pgplot_link
>>>> -rwxr-xr-x 1 500 500 86 2012-01-20 10:03 mesasdk_se_link
>>>> -rwxr-xr-x 2 500 500 42426 2012-01-20 10:03 ndiff
>>>> -rwxr-xr-x 2 500 500 42426 2012-01-20 10:03 ndiff-2.00
>>>> -rwxr-xr-x 1 500 500 12512 2012-01-20 10:03 touchse
>>>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 x86_64-pc-linux-gnu-c++
>>>> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 x86_64-pc-linux-gnu-g++
>>>> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc
>>>> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54
>>>> x86_64-pc-linux-gnu-gcc-4.7.0
>>>> -rwxr-xr-x 2 500 500 119881 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-ar
>>>> -rwxr-xr-x 2 500 500 119817 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-nm
>>>> -rwxr-xr-x 2 500 500 119837 2012-01-20 09:54
>>>> x86_64-pc-linux-gnu-gcc-ranlib
>>>> -rwxr-xr-x 2 500 500 2160578 2012-01-20 09:54
>>>> x86_64-pc-linux-gnu-gfortran
>>>> jared at ubuntu:/opt/mesasdk/bin$ more mesasdk_init.sh
>>>> mesasdk_init.sh: Permission denied
>>>>
>>>> It looks like I should be able to access all these files, but for some
>>>> reason it's still keeping me out
>>>>
>>>> -Jared
>>>>
>>>>
>>>> On Wed, Apr 11, 2012 at 2:30 PM, Richard Townsend <
>>>> townsend at astro.wisc.edu> wrote:
>>>>
>>>>> Could you post the output from 'ls -l /opt/mesasdk/bin'. That will
>>>>> show what permission problems may exist.
>>>>>
>>>>> On Apr 11, 2012, at 4:27 PM, Jared Brooks wrote:
>>>>>
>>>>> Here's a command I found concerning PATH in my .profile:
>>>>>
>>>>> # set PATH so it includes user's private bin if it exists
>>>>> if [ -d "$HOME/bin" ] ; then
>>>>> PATH="$HOME/bin:$PATH"
>>>>> fi
>>>>>
>>>>> And here's the output to that source command:
>>>>>
>>>>> jared at ubuntu:~/mesa$ source $MESASDK_ROOT/bin/mesasdk_init.sh
>>>>> bash: /opt/mesasdk/bin/mesasdk_init.sh: Permission denied
>>>>>
>>>>> I've had a hunch that permissions were at the source of my problems,
>>>>> but I still don't understand why it's keeping me out.
>>>>>
>>>>> -Jared
>>>>>
>>>>> On Wed, Apr 11, 2012 at 2:20 PM, Richard Townsend <
>>>>> townsend at astro.wisc.edu> wrote:
>>>>>
>>>>>> OK, thanks. Please post the output when you run
>>>>>>
>>>>>> source $MESASDK_ROOT/bin/mesasdk_init.sh
>>>>>>
>>>>>> Also, please confirm that you don't have anything else in your
>>>>>> .profile startup script which overwrites the PATH environment variable.
>>>>>>
>>>>>> cheers,
>>>>>>
>>>>>> Rich
>>>>>>
>>>>>> On Apr 11, 2012, at 4:17 PM, Jared Brooks wrote:
>>>>>>
>>>>>> jared at ubuntu:~/mesa$ which gfortran
>>>>>> jared at ubuntu:~/mesa$ echo $MESASDK_ROOT
>>>>>> /opt/mesasdk
>>>>>> jared at ubuntu:~/mesa$ echo $PATH
>>>>>>
>>>>>> /usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
>>>>>>
>>>>>> -Jared
>>>>>>
>>>>>> On Wed, Apr 11, 2012 at 2:14 PM, Richard Townsend <
>>>>>> townsend at astro.wisc.edu> wrote:
>>>>>>
>>>>>>> After you get the 'make: gfortran: Command not found', please run
>>>>>>> the following commands and post the output:
>>>>>>>
>>>>>>> which gfortran
>>>>>>>
>>>>>>> echo $MESASDK_ROOT
>>>>>>>
>>>>>>> echo $PATH
>>>>>>>
>>>>>>> cheers,
>>>>>>>
>>>>>>> Rich
>>>>>>>
>>>>>>> On Apr 11, 2012, at 4:10 PM, Jared Brooks wrote:
>>>>>>>
>>>>>>> I have had these commands in my .profile
>>>>>>>
>>>>>>> export MESASDK_ROOT=/opt/mesasdk
>>>>>>> source $MESASDK_ROOT/bin/mesasdk_init.sh
>>>>>>> export OMP_NUM_THREADS=4
>>>>>>> export LIBRARY_PATH=/usr/lib/x86_64-linux-gnu
>>>>>>> export LD_RUN_PATH=/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu
>>>>>>>
>>>>>>> -Jared
>>>>>>>
>>>>>>> On Wed, Apr 11, 2012 at 1:53 PM, Richard Townsend <
>>>>>>> townsend at astro.wisc.edu> wrote:
>>>>>>>
>>>>>>>> Have you initialized the SDK properly using the appropriate script?
>>>>>>>> You have to do this each time you log in -- or add a line to your start-up
>>>>>>>> file (.cshrc, .bashrc, etc.)
>>>>>>>>
>>>>>>>> On Apr 11, 2012, at 3:33 PM, Jared Brooks wrote:
>>>>>>>>
>>>>>>>> > Hello, I'm running Ubuntu and I can't get MESA installed
>>>>>>>> completely. I'm using the MESA_SDK and I followed the FAQ, yet I'm still
>>>>>>>> stuck. I got the install script to run for a few hours before it stopped
>>>>>>>> and now will only give me this:
>>>>>>>> >
>>>>>>>> > jared at ubuntu:~/mesa$ ./install
>>>>>>>> > checking if ndiff is installed ...
>>>>>>>> > yes!
>>>>>>>> >
>>>>>>>> > /home/jared/mesa/const
>>>>>>>> > building const package.
>>>>>>>> >
>>>>>>>> > gfortran -fno-range-check -fopenmp -I../public -I../private
>>>>>>>> -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c
>>>>>>>> -ffixed-form -ffixed-line-length-132 ../public/const_def.f
>>>>>>>> > make: gfortran: Command not found
>>>>>>>> > make: *** [const_def.o] Error 127
>>>>>>>> >
>>>>>>>> > /home/jared/mesa/const/make
>>>>>>>> > FAILED
>>>>>>>> >
>>>>>>>> >
>>>>>>>> > /home/jared/mesa/const
>>>>>>>> > ./build_and_test FAILED
>>>>>>>> >
>>>>>>>> >
>>>>>>>> > And I found this message in the file mesa/const/test/tmp.txt:
>>>>>>>> >
>>>>>>>> > ./tester: error while loading shared libraries: libgfortran.so.3:
>>>>>>>> cannot open shared object file: No such file or directory
>>>>>>>> >
>>>>>>>> > I found the file libgfortran.so.3 in /opt/mesasdk/lib64/, it
>>>>>>>> seems to be just a pointer to libgfortran.so.3.0.0.
>>>>>>>> >
>>>>>>>> > -Jared
>>>>>>>> >
>>>>>>>> ------------------------------------------------------------------------------
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>>>>>>>> >
>>>>>>>> http://p.sf.net/sfu/Boundary-dev2dev_______________________________________________
>>>>>>>> > mesa-users mailing list
>>>>>>>> > mesa-users at lists.sourceforge.net
>>>>>>>> > https://lists.sourceforge.net/lists/listinfo/mesa-users
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>
>>>>
>>>
>>>
>>
>>
>
>
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