[mesa-users] Installing mesa with gfortran

Wed Sep 14 21:09:46 EDT 2011

Did you set up the number of threads correctly?

I had the same issue with 3611 on ifort 12.1.0 today. Similar failure on
tmp.txt but in the mesa/mxt/test/.

I was running on macmini with 2 cores so I did:

export OMP_NUM_THREADS=2

this fixed my particular problem with tmp.txt but I got bumped in to another
failure later.

Tuguldur

2011/9/14 Ryan O'Leary <oleary at berkeley.edu>

> Hi,
>
> I was having the same issue with gfortran 4.6.1 on Ubuntu for mesa
> revision 3611:
> GNU Fortran (Ubuntu 4.6.0-3~ppa1) 4.6.1 20110409 (prerelease)
>
> I eventually decided to just use the intel compilers.
>
> -Ryan.
>
>
>
>
>
>
> On Wed, Sep 14, 2011 at 4:01 PM, Tsing Wong
> <tsingwong2012 at u.northwestern.edu> wrote:
> > Hi,
> >
> > I tried to install the most recent released copy of mesa with gfortran
> 4.6.1
> > and stuck at building the rates package. Here is the error message shown
> on
> > my screen:
> >
> > /bigdisk/mesa/rates
> > building rates package.
> >
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
> > -ffixed-form -ffixed-line-length-132 ../public/rates_def.f
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
> > -ffixed-form -ffixed-line-length-132 ../private/ratelib.f
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
> > -ffixed-form -ffixed-line-length-132 ../private/pycno.f
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
> > -ffixed-form -ffixed-line-length-132 ../private/raw_rates.f
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
> > -ffixed-form -ffixed-line-length-132 ../private/rates_initialize.f
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -ffree-form -fbounds-check -c -O0
> ../private/rates_names.f
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
> > -ffixed-form -ffixed-line-length-132 ../private/rates_support.f
> > gfortran -fno-range-check  -fopenmp  -I../public -I../private
> > -I../../include -Wunused-value -Werror -W -fimplicit-none   -O2 -c
> > -ffixed-form -ffixed-line-length-132 ../public/rates_lib.f
> > ar crs librates.a rates_def.o ratelib.o pycno.o raw_rates.o
> > rates_initialize.o rates_names.o rates_support.o rates_lib.o
> > make: Warning: File `librates.a' has modification time 6.3 s in the
> future
> > make: `librates.a' is up to date.
> > make: warning:  Clock skew detected.  Your build may be incomplete.
> > gfortran -fno-range-check  -fopenmp -I../../make -I../../public
> > -I../../../include  -fbounds-check -g -c -ffixed-form
> > -ffixed-line-length-132 ../src/test_rates.f
> > gfortran -fopenmp -o ../tester test_rates.o -L../../make -lrates
> > -L../../../lib -lreaclib -lweak -lchem -linterp_2d -linterp_1d -lnum
> -lutils
> > -lalert -lconst -lmtx -lmesaklu -lmesalapack -lmesablas
> > gfortran -fno-range-check  -fopenmp -I../../make -I../../public
> > -I../../../include  -fbounds-check -g -c -ffree-form
> > ../src/reaction_rate_from_
> > cache.f
> > gfortran -fopenmp -o ../show_rates reaction_rate_from_cache.o
> -L../../make
> > -lrates -L../../../lib -lreaclib -lweak -lchem -linterp_2d -linterp_1d
> -lnum
> > -lutils -lalert -lconst -lmtx -lmesaklu -lmesalapack -lmesablas
> >
> > 58c58
> > <                          rne20ap_to_mg24    0.0000000000000000E+00
> > --- field 2    relative error 1.00e+00
> >>                          rne20ap_to_mg24    1.3318310086100496E-08
> > 60c60
> > <                          rmg24ap_to_si28    0.0000000000000000E+00
> > --- field 2    relative error 1.00e+00
> >>                          rmg24ap_to_si28    2.6558494648638122E-06
> > 62c62
> > <                     r_c12_to_he4_he4_he4    0.0000000000000000E+00
> > --- field 2    relative error 1.00e+00
> >>                     r_c12_to_he4_he4_he4    1.4771305847143582E-26
> > 63c63
> > <                            r_ne20_ga_o16    0.0000000000000000E+00
> > --- field 2    relative error 1.00e+00
> >>                            r_ne20_ga_o16    3.8122575515639085E-16
> >
> > /bigdisk/mesa/rates/test
> > TEST FAILED -- compare test_output to tmp.txt
> >
> >
> > /bigdisk/mesa/rates
> > ./build_and_test FAILED
> >
> > Does this happen to anyone too? And does anyone have any idea of how to
> fix
> > that?
> >
> > Thanks,
> > TsingWai
> >
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